Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1106 |
Symbol | |
ID | 5081616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1246718 |
End bp | 1247161 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640498237 |
Product | GatB/Yqey domain-containing protein |
Protein accession | YP_001182633 |
Protein GI | 146292209 |
COG category | [S] Function unknown |
COG ID | [COG1610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000329477 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTAA TTGATCAGCT AAAAGACCAT ATGAAACAAG CCATGATCGC CAAAGAGAAG GTGAGATTGG GTACTATTCG TATGGCATTA GCCGCCATCA AACAGATTGA AGTGGATACC CGCGAATCTC TGACTGATGA GCAGGTTATA GCGGTCTTAA CCAAAATGGT GAAACAACGT CGCGATTCGA TTGCTCAATT TGAAGCAGCG GGACGTAACG AGTTGGCCGA AGCGGAAGCA GCAGAGATTC AAGTTATTGA AACTTTCCTG CCAACTCCCC TCTCAGAGGC GGAAATCGCA GCGTTCATTG ATGCAGCTAT TGTTGAAATG GGTGCATCCT CCATGGCGGA TATGGGCAAA GTAATGGGAG CATTAAAACC TAAAGTTCAA GGACGTGCAG ACATGGGCGC TATCGGCGCT ATGATCCGCG CAAAATTGCA ATAA
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Protein sequence | MSLIDQLKDH MKQAMIAKEK VRLGTIRMAL AAIKQIEVDT RESLTDEQVI AVLTKMVKQR RDSIAQFEAA GRNELAEAEA AEIQVIETFL PTPLSEAEIA AFIDAAIVEM GASSMADMGK VMGALKPKVQ GRADMGAIGA MIRAKLQ
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