Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0991 |
Symbol | |
ID | 5081804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1101487 |
End bp | 1102791 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640498116 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001182519 |
Protein GI | 146292095 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000134867 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCCA GTAAACATCT GATTTTTGCT TTATTTGCGC TTGCGATTAG CCAACCAACA TTGGCCGCAC CTCAACCACT CGATCGTGTC GCAGTCCAAA TTAACGATGG AATTGTGCTC GAAAGTGAAA TCGTCAGCAT GATTGGCACA GTAAAAGCCA ATGCCAAAGC GGCAAATCAA TCGTTACCTT CTGATAGTGC ACTGCGTACT CAGGTTATTG AACGCTTGAT TTTAACCCGT CTACAACTGC AAATGGCCGA TCGTATTGGC TTACATATCG GTGACTTACA ATTAGATCAA GCGATTGAAA ACATCGCTCG TGAACAGAAA ATGTCAGTCG CGCAAATGCA ACAAAAAATT GAAAGTGAAG GCTTAAGTTT TAGTCAGTAC CGTGAACAGC TACGTGAAGA AATCACCCTA GGTGAGATTC AACGCATTCA AGTACAACGC CGTATTCAAG TATCACCGCA AGAAATATCC AGCTTAGTGA AACTGATCCA AGAACAAGGT ATGAAAGATG TGGAATATCA AATTGGCCAT ATCCTAATTG ACGTACCCAA CAACCCGACA AGTGAACAAC TCGAAGCATC CAGCAAACGA GCCAATATCG TCCTTGAGCG TTTGAAAAAT GGGGAAGATT TTCGCCGTAC CGCTATCGCA TCATCATCAG GGCCTAAAGC CCTCGAAGGC GGTATCTGGG ATTATATGAA CATCAACGAA ATGCCAACGC TTTTCGCCGA AGTCCTTAGC GGAGCGAAAA CCGGTGACAT TATCGGCCCA ATTAAAAGTG GGGCGGGGTT TCACATCATT AAGATCATGG ATTCCCGCGG TTTACAAACG AAAGAAATAG AAGAAGTCAG AGCGCGACAT ATTCTGCTTA AGCCATCGCC AATTTTATCC GATGACCGTG CAAAAGCGAT GCTTGAACAA TTCCTAAAAC AAATTCGTGC TGGAGAAGCT AAATTTGAAG ATCTCGCCCG TCAGTATTCA GAGGATCCGG GCTCTGCGGC TAAAGGGGGA GAATTAGGTT GGGCGGATCC CAATATCTAT GTGCCAGAAT TTGCTCAAAC ACTTAGCAGT TTAGCCATAG ATCAAATCAG TGAACCTTTC CGCACAACCC ACGGTTGGCA TATCACTCAA TTAGAAGAAA GAAGAAAAAC CGATGCAACG GATCAGTTCA ATAGCAACCG CGCGCACCAG TTGATCTTCC GTCGCAAATT TAATGAAGAA CTGCAAAACT GGCTAGACGA AATGCGTTCA GACGCATACA TTGAAGTCTT TCAGCCTGAG ACCAACCGAG GTTAA
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Protein sequence | MKPSKHLIFA LFALAISQPT LAAPQPLDRV AVQINDGIVL ESEIVSMIGT VKANAKAANQ SLPSDSALRT QVIERLILTR LQLQMADRIG LHIGDLQLDQ AIENIAREQK MSVAQMQQKI ESEGLSFSQY REQLREEITL GEIQRIQVQR RIQVSPQEIS SLVKLIQEQG MKDVEYQIGH ILIDVPNNPT SEQLEASSKR ANIVLERLKN GEDFRRTAIA SSSGPKALEG GIWDYMNINE MPTLFAEVLS GAKTGDIIGP IKSGAGFHII KIMDSRGLQT KEIEEVRARH ILLKPSPILS DDRAKAMLEQ FLKQIRAGEA KFEDLARQYS EDPGSAAKGG ELGWADPNIY VPEFAQTLSS LAIDQISEPF RTTHGWHITQ LEERRKTDAT DQFNSNRAHQ LIFRRKFNEE LQNWLDEMRS DAYIEVFQPE TNRG
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