| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0798 |
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| Symbol | ipk |
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| ID | 5082008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 889392 |
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| End bp | 890246 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640497924 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001182327 |
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| Protein GI | 146291903 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0322391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGCAG CTATCTCCCG TAATTGGCCC GCGCCAGCCA AACTAAATTT GTTTTTACAC
ATCAATGGCC GCCGCACCGA CGGTTACCAT GAGTTGCAAA CCTTGTTTCA GTTTATCGAT
TACTGCGACA TGCTTGATTT CAAGGTCACT GACAGCTCAG AGCTGATTTT GCATTCGAAT
ATGGCTGGCG TTGTCGCAGA TAGCGATAAC TTAATTCTGC GAGCCGCAAA ATCATTACAA
CAAATGACAA GCTTTAAAGG TGGAGCAGAA ATCTGGCTAG ATAAACGTCT GCCGATGGGT
GGCGGTTTAG GCGGCGGATC ATCGGATGCT GCCACCACAT TAGTGGCACT AAACACGTTA
TGGAACACCC AATTATCGAC CGCAGAACTG GCTAAAATTG GTCTTAAATT GGGTGCCGAT
ATTCCTGTTT TTATTCATGG TTTCGCGGCT TTTGCCGAAG GTATCGGTGA ACGCTTACAA
GTGGTATCAC CACCAGAGCC TTGGTATTTA GTTATTGCAC CAGATGCCCA CGTTTCCACC
GCCGAAGTGT TCCAAGATCC CCTTTTACCA CGTAACACCC CAAAACTTGC CATCGATACT
TTGATGAGTC AGGCGTGGAT AAATGATTGC CAAAAACTGG TCGTATCTAA ATACCCTCAA
GTTGCCAAGG CCTTGGGCTG GCTGCTAGAA TATGCGCCGT CGAGAATGAC CGGAACAGGC
GCATGCGTGT TTGGGGAATT TACACAACAG CAACAAGCTC TCGCAGCCTT GGCGAAATTA
CCGTCTGATA TGCAAGGATT TGTTGCAAAA GGGATGAATA TTTCGCCGCT TATCACGCGG
CTCAATCATC CGTAA
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| Protein sequence | MSAAISRNWP APAKLNLFLH INGRRTDGYH ELQTLFQFID YCDMLDFKVT DSSELILHSN
MAGVVADSDN LILRAAKSLQ QMTSFKGGAE IWLDKRLPMG GGLGGGSSDA ATTLVALNTL
WNTQLSTAEL AKIGLKLGAD IPVFIHGFAA FAEGIGERLQ VVSPPEPWYL VIAPDAHVST
AEVFQDPLLP RNTPKLAIDT LMSQAWINDC QKLVVSKYPQ VAKALGWLLE YAPSRMTGTG
ACVFGEFTQQ QQALAALAKL PSDMQGFVAK GMNISPLITR LNHP
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