| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0757 |
|---|
| Symbol | |
|---|
| ID | 5082065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 843162 |
|---|
| End bp | 845360 |
|---|
| Gene Length | 2199 bp |
|---|
| Protein Length | 732 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640497882 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001182286 |
|---|
| Protein GI | 146291862 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000601769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTG CACTGGTTGC GACCTTAGTA TTGACATCCG GCATAGCGAA TGCCGACGAA
GGGCAATGGC AACCTTATCA AATGCCTTCA ATTGCAGACA AACTCAGTGA ACGCGGAATC
GACATTCCTG CCGAAAAACT GGCCGATCTA ACTAGCTATC CAATGAATGC CGTTGTCGGG
CTGGGCTATT GTACCGCCAG TTTTGTCTCC CCCCAAGGGC TAGTTGTGAC AAACCATCAT
TGTGCCTACA AAGCGATACA ATATAACACT AAGCAAGAAC ATAACTATCT AGAACAAGGC
TTTTTAGCCA CATCAATGGA TAAAGAACCT TCGGCTGGGC CGAACGAGCG TTTATATATT
ACCGAAGCCG TCACCGATGT AACCAAGGAC GTCACGAAAG AGTTAAGCCA AGATCCCCTC
ACCCGCTATG AAGAAATTCA AAATAATAGC AAAGCACTCA TAAAAAACTG TGAAGTGGAT
GATAACTATC GCTGTAATGT CCGTAGTTTT CATAACGGCT TAGAATACTA CTTAATCAAG
CAATTGATGA TCCGCGATGT ACGATTAGTC TATGCACCGC CAGAAAGTGT TGGCGGTTAT
GGTGGTGATA TCGATAATTA TGAATATCCA CGCCATTCGG GGGATTTTGC CTTCCTAAGG
GCTTACGTGG GTAAAGATGG TAAGCCCGCA GCCTATGCGG AGGATAACAT TCCCTACAAA
CCGAAAAGCT ACCTTAAAGT GAATGCCGAT GGCGTTAAGG CTGGTGATGG CGTGTTTGTT
GCGGGTTATC CTGGAACGAC TAGCCGCTAT AATCTCACTA GCGAGCTTAA ATTTGCCAGT
GATTGGCTCT ATCCAACCCA AGCCAAACGC TATCAATTAC AGATTGATAC CATCAACGCT
ATGGGGCAAG AAGATGCAGA TATCGCCATA AAATACGCTG GTAATATGGC CTCAATGGCC
AACCGAATGA AGAAACTTAA TGGCCTATTA GCGGGTTTTA AAGCAACGGA TATCATTGGC
ATTAAGCAAA GTCGTGAAGA TAATTTTTTA GCTTGGCTTA AACAAAACCC TAAACTCAAT
CAAAATCTTA TTGCAGAATT AGAAGTGTTA CTCGCCGAGC AGCAACAAGT ATTCCAGAGT
AATTATTACT TTACCAATGC CCAATCGAGC ACACTGTTAA CCGCCGCTAA CAGCCTTTAT
CGCCTTGCGA AGGAAAAACA AAAGAGCGAT GCTGAACGCG AAATTGGTTA TCAAGAGCGT
GATTTGGCGA TGTTTAGCTC GCGCTTAAAA CGTATCGATT CAAGCTTTCA CGTTGACGTA
GATAAGACAC TATGGCAACA AGACCTCAGA GCATATCTTG CGCAACCGAA TCGCATAGCG
GCCCTTGATG ACGCACTGGA TCTCAACAAT AAAGAGACAA ATCTCGAGGC AAAACTCGAT
GGTTTGTATT CACTCACGAC GCTCACAGAC CAAGCCCAGC GTCTCGCCTG GATGGATGCC
GATACGACAA CCTTCGAAAC CAGTACCGAT CCCTTTATTC GTTTAGCCGT TGCGCTCTAC
GATACCAATA TGGCACAGGA GAAAGCGGAA AAAATACTCG ATGGTAAGTT ATCGACTGCA
CGTCCTGACT ATATGGCCGC GGTTATCGAG TATTACAAAG CCAATAACTG GCCTGTCTAC
CCTGATGCCA ACGGTACACT TCGTATCAGC TACGGTATGG TGGATGGTTA TCAATCCCGT
GATGCACTCT ATAAACAGCC GTTTACTCGT CTGGATGGCA TAGTGGCTAA ACACACAGGA
GCCGAACCCT ACAATGCCCC CCAAAAACTA CTTGATGCCA TTAGCGAGCA ACGCTTTGGC
GATCACCTTG TGAAGTCAGT TTATCAAGAT CCCCGCGGCT GGATTTGCCG TCTGTTCTCT
TGCTTAGATA AACCAGAAGA ATTTAACTCA GTGCCGGTTA ACTTCTTATC CAGCGTAGAT
ACCACAGGTG GCAACTCAGG TTCACCCGTC TTTAACGGTA AAGGGGAATT GGTGGGCCTT
AACTTCGACT CTACCTATGA AGCGATTACT AAGGATTGGT TCTTCAATCC GACAATCACC
CGCGCCGTAC ACGTGGATAT CCGTTATATC CTGTGGATGA TGGATAAAGT TGACCATGCC
GATAATCTGA TTAAAGAACT GGATTTAGTG AGAAATTAA
|
|---|
| Protein sequence | MRIALVATLV LTSGIANADE GQWQPYQMPS IADKLSERGI DIPAEKLADL TSYPMNAVVG
LGYCTASFVS PQGLVVTNHH CAYKAIQYNT KQEHNYLEQG FLATSMDKEP SAGPNERLYI
TEAVTDVTKD VTKELSQDPL TRYEEIQNNS KALIKNCEVD DNYRCNVRSF HNGLEYYLIK
QLMIRDVRLV YAPPESVGGY GGDIDNYEYP RHSGDFAFLR AYVGKDGKPA AYAEDNIPYK
PKSYLKVNAD GVKAGDGVFV AGYPGTTSRY NLTSELKFAS DWLYPTQAKR YQLQIDTINA
MGQEDADIAI KYAGNMASMA NRMKKLNGLL AGFKATDIIG IKQSREDNFL AWLKQNPKLN
QNLIAELEVL LAEQQQVFQS NYYFTNAQSS TLLTAANSLY RLAKEKQKSD AEREIGYQER
DLAMFSSRLK RIDSSFHVDV DKTLWQQDLR AYLAQPNRIA ALDDALDLNN KETNLEAKLD
GLYSLTTLTD QAQRLAWMDA DTTTFETSTD PFIRLAVALY DTNMAQEKAE KILDGKLSTA
RPDYMAAVIE YYKANNWPVY PDANGTLRIS YGMVDGYQSR DALYKQPFTR LDGIVAKHTG
AEPYNAPQKL LDAISEQRFG DHLVKSVYQD PRGWICRLFS CLDKPEEFNS VPVNFLSSVD
TTGGNSGSPV FNGKGELVGL NFDSTYEAIT KDWFFNPTIT RAVHVDIRYI LWMMDKVDHA
DNLIKELDLV RN
|
|---|
| |