Gene Sputcn32_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0545 
Symbol 
ID5078071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp592755 
End bp593225 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content46% 
IMG OID640497672 
Producthypothetical protein 
Protein accessionYP_001182076 
Protein GI146291652 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000254909 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTTT CAAATCCAAT TTTAATGTGG TCAGTTATTG GTATTATCTT GATGTTAGCC 
GAACTCATTG TTCCGGGTGG TATAGTGATA TTGCTGGGAG CTGCCTGCTT GGTTGTTGCT
GGCGCATTGG GTATCGGGTT AGTGGAAGGC ATAGTGCAGA GTATGACATT GTGGTTTATT
TCCGCGATTG TTTTGTTGTT GAGCTTTCGG CAGTTAACCC AAAGACTGGT AGGGGGCGAT
TCACATGTCG ATAATACCGA TGAAGAACTC GACATCTACA ATCAAATTGC TCGTGTAAAA
CAAACTATCG GTCCCGGACA AACAACGGGG CGGGTTGAGT TTCAAGGGAG CGAATGGCCT
GCTCTTGGCG ATGGCAGTAT TATTGCCGTG GGTTGTGAAG TTCGAATTAT CTGCCGAGAA
AACATTGCCC TAGTGGTTGA GCCTGTTACT CAGGCAACGT CTCAAAACTA A
 
Protein sequence
MELSNPILMW SVIGIILMLA ELIVPGGIVI LLGAACLVVA GALGIGLVEG IVQSMTLWFI 
SAIVLLLSFR QLTQRLVGGD SHVDNTDEEL DIYNQIARVK QTIGPGQTTG RVEFQGSEWP
ALGDGSIIAV GCEVRIICRE NIALVVEPVT QATSQN