Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0545 |
Symbol | |
ID | 5078071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 592755 |
End bp | 593225 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640497672 |
Product | hypothetical protein |
Protein accession | YP_001182076 |
Protein GI | 146291652 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000254909 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCTTT CAAATCCAAT TTTAATGTGG TCAGTTATTG GTATTATCTT GATGTTAGCC GAACTCATTG TTCCGGGTGG TATAGTGATA TTGCTGGGAG CTGCCTGCTT GGTTGTTGCT GGCGCATTGG GTATCGGGTT AGTGGAAGGC ATAGTGCAGA GTATGACATT GTGGTTTATT TCCGCGATTG TTTTGTTGTT GAGCTTTCGG CAGTTAACCC AAAGACTGGT AGGGGGCGAT TCACATGTCG ATAATACCGA TGAAGAACTC GACATCTACA ATCAAATTGC TCGTGTAAAA CAAACTATCG GTCCCGGACA AACAACGGGG CGGGTTGAGT TTCAAGGGAG CGAATGGCCT GCTCTTGGCG ATGGCAGTAT TATTGCCGTG GGTTGTGAAG TTCGAATTAT CTGCCGAGAA AACATTGCCC TAGTGGTTGA GCCTGTTACT CAGGCAACGT CTCAAAACTA A
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Protein sequence | MELSNPILMW SVIGIILMLA ELIVPGGIVI LLGAACLVVA GALGIGLVEG IVQSMTLWFI SAIVLLLSFR QLTQRLVGGD SHVDNTDEEL DIYNQIARVK QTIGPGQTTG RVEFQGSEWP ALGDGSIIAV GCEVRIICRE NIALVVEPVT QATSQN
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