Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0457 |
Symbol | pyrE |
ID | 5080712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 492231 |
End bp | 492872 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640497577 |
Product | orotate phosphoribosyltransferase |
Protein accession | YP_001181988 |
Protein GI | 146291564 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.191717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGCCT ATCAACGTGA GTTTATTGAA TTTGCCTTAG AGCGTCAGGT ACTGCGATTC GGCGAGTTTA CCCTTAAATC GGGCCGTATC AGTCCTTATT TCTTCAATGC AGGTTTGTTC AATACCGGCC GAGATTTAGC GCGTCTTGGC CGTTTTTATG CCGCTGCGTT AGTGGATTCT GGCATTGATT ATGACTTGCT GTTTGGTCCC GCTTACAAAG GCATTCCGAT TGCGACGACT ACGGCGGTTG CCTTGTGTGA GCATCACGAT ATCGACATCC CTTACTGCTT TAATCGCAAA GAAAAGAAAG ATCACGGCGA AGGTGGCAGC TTAGTCGGTA GCGAGCTAAA AGGCCGTGTG ATGCTGGTGG ACGATGTGAT TACTGCGGGT ACTGCGATTC GTGAGTCGAT GGAAATCATC GAAGCCCATA AAGCGCAATT AGCCGGCGTG TTGATTGCCT TAGACAGGCA AGAGAAAGGC AAGGGCGAAT TATCGGCCAT CCAAGAGGTT GAGCGCGATT TTGGTTGCGG TATTGTGGCG ATTATTAAAC TCGCCGATCT GATCAGCTAT CTGTCTGAAA AACCAGGGAT GGAAGTGCAG CTTGCTGCCG TGAGCCAGTA CCGCGAGCAA TACGGGATTT AA
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Protein sequence | MKAYQREFIE FALERQVLRF GEFTLKSGRI SPYFFNAGLF NTGRDLARLG RFYAAALVDS GIDYDLLFGP AYKGIPIATT TAVALCEHHD IDIPYCFNRK EKKDHGEGGS LVGSELKGRV MLVDDVITAG TAIRESMEII EAHKAQLAGV LIALDRQEKG KGELSAIQEV ERDFGCGIVA IIKLADLISY LSEKPGMEVQ LAAVSQYREQ YGI
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