Gene Sputcn32_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0096 
Symbol 
ID5078871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp109915 
End bp110664 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content43% 
IMG OID640497216 
Productlytic transglycosylase, catalytic 
Protein accessionYP_001181631 
Protein GI146291207 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAGGC TCTTGATGCA CCGTACTGAT ATACAGTTAT CGGCATTGTT TAAATGGCCT 
AGTAACTTAT GGTTGTTAGG AATATGCCTG TTGCTGCTTT CGAGTGCAGT GATGGCGAAT
AATGCACAGG ATGCCCATTC AAAACCTCGA ATCGTGGCAC GTTATTCTGA GACGGGAATC
CTCAGCCGCG AAGGGCAAGA GAAGTTTAAA GTATATCAAT ATCAACAAGC TAATGGTGTT
ACTGTATTTT CCGATAAGGC ACCCAGTAAT AACCAATACC AAATTTTATT GTACGAGTGT
TTTGCCTGCC GCCCGGACTC GAACATTGAT TGGAATGCCA TTCGTTTATT TAGCGCAAAT
TATGATGCAT TAATCGCTCA AGCCGCCCAT AAACATCAGT TAGAACCTGC GTTAATTCGC
GCCGTGATCC ATGCTGAATC GGCTTTTAAT TCCCGCGCGG TATCACGTAG TGGCGCTATG
GGATTAATGC AATTAATGCC AGAAACAGCG AAAGAAATGG GCGTTATAAA TGCATTTTTG
CCTGAAGAAA ATATTTTGGG TGGCAGTAAA TATTTAGCAC AAATGCTAAA GCAATTTAAT
GGCGATATTG CCTTAGCCTG TGCAGCCTAT AATGCGGGAC CAACAACTGT GACACAGTAT
AATGGCATTC CGCCCTATCC TGAGACTCAA GCCTATGTTG AGCGGGTACA AATTTTATTG
AAGCGCTATC GTGAACAAAA CCGAGCCTAG
 
Protein sequence
MYRLLMHRTD IQLSALFKWP SNLWLLGICL LLLSSAVMAN NAQDAHSKPR IVARYSETGI 
LSREGQEKFK VYQYQQANGV TVFSDKAPSN NQYQILLYEC FACRPDSNID WNAIRLFSAN
YDALIAQAAH KHQLEPALIR AVIHAESAFN SRAVSRSGAM GLMQLMPETA KEMGVINAFL
PEENILGGSK YLAQMLKQFN GDIALACAAY NAGPTTVTQY NGIPPYPETQ AYVERVQILL
KRYREQNRA