Gene Spro_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1927 
Symbol 
ID5606656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp2109084 
End bp2109620 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content56% 
IMG OID640937463 
Producthypothetical protein 
Protein accessionYP_001478158 
Protein GI157370169 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.339305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00184616 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACAAGT CAATGTTAGC CGGTGTGGGT ATTGGTATTG CAGCAGCTCT GGGTATTGCT 
GCGGTGGCCA GTCTTGATGT TTTTTCTTCC GGTCCGCAAT ACGCGCAGGT TCTTGCCGCA
ACGCCGATCA AAGAAACCAT CAAAACACCG CGTCAGGAAT GCCGCAATGT AACCGTCACT
CATCGTGCGC CAGTGCAGGA TGAGAACCGC ATTGCCGGTT CGGTTCTGGG TGCAGTAGCC
GGTGGCGTTA TTGGTCATCA GTTCGGTGGT GGTCGCGGTC GTGATGTGGC GACGGTGGTG
GGTGCCTTGG GCGGCGGTTA CGCCGGTAAC CAGGTGCAGG GTGCGATGCA GAATAACGAC
AGCACCACCA GCACGCAGCA GCGATGCAGA ACGGTCTACG ACAAATCACA GAAAATGCTG
GGTTACGACG TGACCTACAA AATTGGCACT CAGCAGGGCA AGATCCGCAT GGATCACGAT
CCCGGCACCC AGATCCCGCT GGATAAAAGC GGCCAACTGG TGCTGAATAA AGCCTAA
 
Protein sequence
MNKSMLAGVG IGIAAALGIA AVASLDVFSS GPQYAQVLAA TPIKETIKTP RQECRNVTVT 
HRAPVQDENR IAGSVLGAVA GGVIGHQFGG GRGRDVATVV GALGGGYAGN QVQGAMQNND
STTSTQQRCR TVYDKSQKML GYDVTYKIGT QQGKIRMDHD PGTQIPLDKS GQLVLNKA