Gene Spea_4037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4037 
Symbol 
ID5664421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4902556 
End bp4903692 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content48% 
IMG OID641238701 
Productcrotonobetainyl-CoA dehydrogenase 
Protein accessionYP_001503882 
Protein GI157963848 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA AATTAACCGA CGAACAAGAG CTTTTTGTTG CAGGTATTCG TGACCTGATG 
GCTAAAGAAA ACTGGGAAAG TTATTTCGCA GAGTGCGATG AGAACAGCCA GTACCCAGAG
CGTTTTGTTA AAGAGCTTGC TGAAATGGGT ATCGACAGCT TGTTGTTGCC AGAAGAGCAC
GGCGGATTCA ACGAAGGCAT GGTAACGCTA GCGGTGATCT GGGAAGAGTT AGGCCGCTTA
GGTGCGCCAA CTTACGTTCT ATACCAACTA CCTGGTATCA CTACCATGCT AAGACACGGT
AGCCCAGAGC AGATCGATAA GATCATGACA CTACGTGGCA CAGGTAAGCA GATGTGGAAC
TCAGCGATCA CTGAGCCAAG TGCAGGTTCT GACGTGGGTA GCTTGTTAAC TACTTATAAG
CGTCGTGATG GCAAGGTGTA TTTGACCGGT AGTAAGTGCT TCATTACCAG TGCGGCGGGT
GCGCCTTACA TCGTGGTTAT GGCTAAAGAT GCAGACTCAG AGAAGCCAAT CTTCACCGAG
TGGTTTGTCG ATATGTCTAA GCCAGGTATC AAGATGAGCA AGCTACCAAA GCTAGGTTTG
AAGATGGACA GCTGCTGTGA GCTTCAATTT GACGAGTTTG AGCTAGAAGA GTCAGACATG
TTCGGTATCG AAGGTAATGG CTTCATGCGT GTTAAAGAGG AGTTTGACTC TGAGCGCTTC
CTTGTGGCCC TAACTAACTA CGGTGCGGCT TACTGTGCAT TCGAAGATGC GGCCAAGTAC
GCTAACCAAC GTGTTCAGTT CGGTGAGGCT ATTGGCCGTT ACCAGTTGAT CCAAGAGAAG
TTTGCCCATA TGGCTATCAA GCTAAACAGC ATGAAGAACA TGGTCTATGA AGCAGCGTGG
AAGTGTGACA ACGGCACTAT GACATCGGGC GACTCGGCAA TGTGTAAGTT CTACTGCGCC
AATGCAGGTT TTGAAGTCAT CGATTCCGCT ATGCAAGTGC TAGGTGGTTA CGCGATTGCA
GGCGAGCACC GTATCAGCCG TATGTGGCGT GATATTCGTG TTGACCGTGT CTCTGGTGGT
TCTGATGAAA TGCAGATCTT AACTTTAGGC CGTGAAGTGT TAAAGCGCTA TCGCTAA
 
Protein sequence
MDFKLTDEQE LFVAGIRDLM AKENWESYFA ECDENSQYPE RFVKELAEMG IDSLLLPEEH 
GGFNEGMVTL AVIWEELGRL GAPTYVLYQL PGITTMLRHG SPEQIDKIMT LRGTGKQMWN
SAITEPSAGS DVGSLLTTYK RRDGKVYLTG SKCFITSAAG APYIVVMAKD ADSEKPIFTE
WFVDMSKPGI KMSKLPKLGL KMDSCCELQF DEFELEESDM FGIEGNGFMR VKEEFDSERF
LVALTNYGAA YCAFEDAAKY ANQRVQFGEA IGRYQLIQEK FAHMAIKLNS MKNMVYEAAW
KCDNGTMTSG DSAMCKFYCA NAGFEVIDSA MQVLGGYAIA GEHRISRMWR DIRVDRVSGG
SDEMQILTLG REVLKRYR