Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_4037 |
Symbol | |
ID | 5664421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4902556 |
End bp | 4903692 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641238701 |
Product | crotonobetainyl-CoA dehydrogenase |
Protein accession | YP_001503882 |
Protein GI | 157963848 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTA AATTAACCGA CGAACAAGAG CTTTTTGTTG CAGGTATTCG TGACCTGATG GCTAAAGAAA ACTGGGAAAG TTATTTCGCA GAGTGCGATG AGAACAGCCA GTACCCAGAG CGTTTTGTTA AAGAGCTTGC TGAAATGGGT ATCGACAGCT TGTTGTTGCC AGAAGAGCAC GGCGGATTCA ACGAAGGCAT GGTAACGCTA GCGGTGATCT GGGAAGAGTT AGGCCGCTTA GGTGCGCCAA CTTACGTTCT ATACCAACTA CCTGGTATCA CTACCATGCT AAGACACGGT AGCCCAGAGC AGATCGATAA GATCATGACA CTACGTGGCA CAGGTAAGCA GATGTGGAAC TCAGCGATCA CTGAGCCAAG TGCAGGTTCT GACGTGGGTA GCTTGTTAAC TACTTATAAG CGTCGTGATG GCAAGGTGTA TTTGACCGGT AGTAAGTGCT TCATTACCAG TGCGGCGGGT GCGCCTTACA TCGTGGTTAT GGCTAAAGAT GCAGACTCAG AGAAGCCAAT CTTCACCGAG TGGTTTGTCG ATATGTCTAA GCCAGGTATC AAGATGAGCA AGCTACCAAA GCTAGGTTTG AAGATGGACA GCTGCTGTGA GCTTCAATTT GACGAGTTTG AGCTAGAAGA GTCAGACATG TTCGGTATCG AAGGTAATGG CTTCATGCGT GTTAAAGAGG AGTTTGACTC TGAGCGCTTC CTTGTGGCCC TAACTAACTA CGGTGCGGCT TACTGTGCAT TCGAAGATGC GGCCAAGTAC GCTAACCAAC GTGTTCAGTT CGGTGAGGCT ATTGGCCGTT ACCAGTTGAT CCAAGAGAAG TTTGCCCATA TGGCTATCAA GCTAAACAGC ATGAAGAACA TGGTCTATGA AGCAGCGTGG AAGTGTGACA ACGGCACTAT GACATCGGGC GACTCGGCAA TGTGTAAGTT CTACTGCGCC AATGCAGGTT TTGAAGTCAT CGATTCCGCT ATGCAAGTGC TAGGTGGTTA CGCGATTGCA GGCGAGCACC GTATCAGCCG TATGTGGCGT GATATTCGTG TTGACCGTGT CTCTGGTGGT TCTGATGAAA TGCAGATCTT AACTTTAGGC CGTGAAGTGT TAAAGCGCTA TCGCTAA
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Protein sequence | MDFKLTDEQE LFVAGIRDLM AKENWESYFA ECDENSQYPE RFVKELAEMG IDSLLLPEEH GGFNEGMVTL AVIWEELGRL GAPTYVLYQL PGITTMLRHG SPEQIDKIMT LRGTGKQMWN SAITEPSAGS DVGSLLTTYK RRDGKVYLTG SKCFITSAAG APYIVVMAKD ADSEKPIFTE WFVDMSKPGI KMSKLPKLGL KMDSCCELQF DEFELEESDM FGIEGNGFMR VKEEFDSERF LVALTNYGAA YCAFEDAAKY ANQRVQFGEA IGRYQLIQEK FAHMAIKLNS MKNMVYEAAW KCDNGTMTSG DSAMCKFYCA NAGFEVIDSA MQVLGGYAIA GEHRISRMWR DIRVDRVSGG SDEMQILTLG REVLKRYR
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