Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3494 |
Symbol | |
ID | 5663880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4271762 |
End bp | 4273627 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641238150 |
Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
Protein accession | YP_001503342 |
Protein GI | 157963308 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAAGCA TCAACTCATT CCCATCGTCG TTAGTCTGGA ATAACATGGA TAAAACAGTA GAAAAAAAGC TTACTAAATG GCTTAAACAG CAGAAAAAAG CCTGTGGTTT TTATCTGAAT CTGTCGGTTT TTTTCGGTGT GTTAACCGGA CTAAGCTTGA TGTGCCAAGC CTGGCTCATA GCAACAGTGC TGCAAGGGAT TATTATTGAT GAGTTACCTA AGAGCGATTT CATTAATCAC TTCTGGGCGC TGCTAGCACT AACGGTAGTT CGTGGTGTAC TCGCTTTTGC TCGTGAGCGT GCCAGTTTTC AGGCTGGAGC AAGGCTTCGG GTTCAGATGC GCGGCGCGGT GCTCGATAAG TTAGCCTTGC TCGGCCCAGC CTTTATTAAG GGCAAGCCCG CTGGCAGCTG GGCCAGTATC GTGCTGGAGC AAGTGGAAGA TCTACAAGAT TTCTACGCCC GTTATCTGCC ACAAGTGGTG TTGGCGGGAT TCATTCCCTT GATCATTTTG GTCGCGGTAT TTCCGATCAA TTGGGCGGCG GGCCTTATTT TGTTGGCGAC CGCACCGCTT ATTCCTATGT TCATGATTTT AGTTGGCATG GGCGCTGCCG ATGCTAATCG CAAGAATTTC AGTGCATTGG CTCGCTTAAG CGGCCACTTT ATGGATAGGC TAAAAGGCCT GTCTACCCTC AAGTTATTCA ATCAAGGCGA GAAAGAAGCA AGAGTTATCC GTAAGGCGTC GGAAGAATTT CGCGAGCGCA CCATGGCGGT GCTGCGAATG GCGTTTCTAA GCTCTGCGGT ACTGGAGTTT TTTGCGGCGG TATCGATAGC GGTACTCGCT GTTTACTTTG GCTTTAGCTA CTTACACCAT CTGAATTTTG GTCACTATGG CGTTTCAATC AGTTTGTTTA CTGGTTTGTT TGTGTTGATC TTAGCGCCTG AATTCTATCA GCCTCTTAGA GACATGGGCA CTCACTATCA CGCCAAAGCT CAAGCTATTG GTGCGGCACA AGAGCTAATG GCGTTGCTGG ACCACCCTAC CGAGCAATAT GGGGGTGATA AACAAGTGAA CGGCGCCGTG GAGATTGAGG CCAAAGATGT ATCTGTCTAT AGCTTAGATG GCAGCCTATT ACTGGGGCCT GTCAGTTTCC AGATTGAGAC CAATGAACAT GTGGCGATAG TTGGCCCAAG TGGCGCTGGC AAAACCAGTT TGCTTAACGC CCTACTGGGT TTTTTGCCTT ACAAGGGGCA ACTTAAGATT GCAGGTACTG AGCTAAGCGA ATTAGCGCTC GAAGATTGGC GTAAGCAGTT GGCATGGCTT GGGCAAGAGC CGCAGCTTTT CCACGGCACT TTACGAGACA ATATTGCCAT GGGACGAGCC CTATCGGATG AAGCGATCTG TAAGTTGTTA GAGCAGGCAC AGATCTTAGA TTTTGTTGAG CAGCAGCCAC TGGGGCTGGA TTATCCTATT GGGGAGCAAA CGGCAGGATT ATCTGTGGGT CAGGCGCAGC GAATAGCCTT GGCGCGTGCA CTGGCTCAGC AGTCGCAACT CTTCATTCTC GATGAGCCTA CTGCGAGTCT AGATAGCTTA AGTGAGCAGG CGGTACAAAG TGCCTTAACG GCAGCCATGC AAGGTAAGGC ATGTGTGATG GTTACCCATA GATTAGAGAA TCTGAGCGCC ATGGATAAAG TCTTGGTGAT GGAGAAGGGC ATTATAGTGC AGCAAGGGAC ATATGAAGAG CTTGCCTCAA AGCCCGGTAC CTTTAAACAG ATGCTAGAAG AAGCAGCAAG TGTGAGTGAG TTCGAGCTTA AAGTCGACAC TCAAGACGCG CATATGCAGC AAACACAAGC TGAGGGAGAT AAGTAA
|
Protein sequence | MPSINSFPSS LVWNNMDKTV EKKLTKWLKQ QKKACGFYLN LSVFFGVLTG LSLMCQAWLI ATVLQGIIID ELPKSDFINH FWALLALTVV RGVLAFARER ASFQAGARLR VQMRGAVLDK LALLGPAFIK GKPAGSWASI VLEQVEDLQD FYARYLPQVV LAGFIPLIIL VAVFPINWAA GLILLATAPL IPMFMILVGM GAADANRKNF SALARLSGHF MDRLKGLSTL KLFNQGEKEA RVIRKASEEF RERTMAVLRM AFLSSAVLEF FAAVSIAVLA VYFGFSYLHH LNFGHYGVSI SLFTGLFVLI LAPEFYQPLR DMGTHYHAKA QAIGAAQELM ALLDHPTEQY GGDKQVNGAV EIEAKDVSVY SLDGSLLLGP VSFQIETNEH VAIVGPSGAG KTSLLNALLG FLPYKGQLKI AGTELSELAL EDWRKQLAWL GQEPQLFHGT LRDNIAMGRA LSDEAICKLL EQAQILDFVE QQPLGLDYPI GEQTAGLSVG QAQRIALARA LAQQSQLFIL DEPTASLDSL SEQAVQSALT AAMQGKACVM VTHRLENLSA MDKVLVMEKG IIVQQGTYEE LASKPGTFKQ MLEEAASVSE FELKVDTQDA HMQQTQAEGD K
|
| |