Gene Spea_3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3064 
Symbol 
ID5663454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3758701 
End bp3759483 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content45% 
IMG OID641237705 
Producttriosephosphate isomerase 
Protein accessionYP_001502916 
Protein GI157962882 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000137173 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTTA GACGTCCCAT GGTTGCTGGT AATTGGAAAA TGAACGGCAG TGCGCAGTTG 
GCGCAAGAGC TATTCAATAA GTTCGCTACC AAGCTCCAAG ATGATTCAGT GGAAGTGGTT
TTGTGTCCAC CTTCTATTTA CTTAGAGAGT GTTCGACAAC TACTAGATGA AAATAAAGAA
ACCTTAAATG GTTGCTTAGT CAGAATGGGA ACTCAAAACC TAAGTCAACA TGACTTTGGA
GCCTATACTG GTGAAATATC TGGTCAGATG TTAAAGGATT CAGGATGTCG ATATGTTATT
ATCGGGCATT CAGAACGTCG CCGTATGTAC GGAGAGACGA GTAACATAGT GGCAGAGAAA
TTTGCTGCAG CTCAGAAACA TGGTTTGACC CCAATATTAT GTGTTGGTGA GTCGGGTCCA
GCTCGTGAAG CGAGACGCAC TTTTGAAGTG ATCGCCGAAG AGTTAGATGT GGTCATTGAA
AAGAATGGCA CCATGGCTTT TGACAACGCT ATTATCGCTT ACGAGCCATT ATGGGCAGTA
GGGACAGGTA AGAGTGCTAC GCCAGAGCAG GCTCAAGAAG TTCATGCGTT TATCCGCAAA
CGCCTCTCTG AAGTATCTCC ATTTATCGGA GAAAATATCA GGATTTTGTA CGGTGGTAGC
GTAACACCGA GTAATGCAGC AGACTTGTTT GCTCAACCTG ATGTAGACGG TGGATTGATT
GGCGGTGTAA GCCTCAATGC TACCGAATTT CTCAGTTTAT GTACGATAGC GATGAGCGCA
TAA
 
Protein sequence
MALRRPMVAG NWKMNGSAQL AQELFNKFAT KLQDDSVEVV LCPPSIYLES VRQLLDENKE 
TLNGCLVRMG TQNLSQHDFG AYTGEISGQM LKDSGCRYVI IGHSERRRMY GETSNIVAEK
FAAAQKHGLT PILCVGESGP AREARRTFEV IAEELDVVIE KNGTMAFDNA IIAYEPLWAV
GTGKSATPEQ AQEVHAFIRK RLSEVSPFIG ENIRILYGGS VTPSNAADLF AQPDVDGGLI
GGVSLNATEF LSLCTIAMSA