| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3049 |
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| Symbol | |
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| ID | 5663439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3740090 |
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| End bp | 3740953 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237688 |
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| Product | nucleoside-specific channel-forming protein Tsx |
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| Protein accession | YP_001502901 |
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| Protein GI | 157962867 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000184608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG TTAAAACTTT CGCTCTAGCA GCTACTGCTA TTGCAGCAAC AATGTCTGCA
CCTACATTCG CTGCTGACCG TTCTGATCTA CGTTCTGGCG ATTACAGCTG GATGCAGTTC
AACGCAATGT ACGCTGTAAA CGAACTTCCA CGTTCTGACG CTGATGATGG TGGTCATGAT
TATCTAGAAA TGGAATTTGG CGGCCGCGCT GGCATCGTTG ACCTATACGG TTATGTTGAT
GTGTTCAACT TGGCTAACAG CAGCTCAGGC GACAAAGGCG CTGGTAAGAG CAAGATGTTC
ATGAAATTCG CTCCTCGTTT CTCTATCGAT GCGATGACTG GTTGGGATCT TTCTGCTGGT
CCAATCCAAG AAGTTTACTT CTCAACTCTA TTTAACTGGG GTGGTGGCGC TATCAGCGGT
GTAGATGCTG ATGGTAATGA GCACGGCGGC GACGTAAACA TGTCTTTCTG GGGTCTTGGT
GCCGATGTAA TGGTTCCGTG GTTAGGTAAG ACTGGCATGA ACCTTTATGC TACTTACGAC
ATGAACGCTA AAGATTGGAA CGGTTACCAG TTCTCTATGA ACTGGTTCAA GCCAGTAATG
AACTTCGATA ACGGTTCATT CGTTTCTTTC CAAGGTTATG TTGATTACCA GTTTGGTGCT
GACGCAGTTG ATGATATGTA TGTTCCTACT ACTTCAAGTG GTGGCGCTGC ATACTTCGGT
CTACACTGGC ATTCAGATAA CTATGCACTT GGTTACGGTC TAAAGGCGTA CCAAGATGTG
TATTTAGTTA AAGATGATGG CGGTATCGTA GGTCTTGAAT CTACAGGCTT CGCACATTAC
TTTACTGCTA CTTACAAGTT CTAA
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| Protein sequence | MKNVKTFALA ATAIAATMSA PTFAADRSDL RSGDYSWMQF NAMYAVNELP RSDADDGGHD
YLEMEFGGRA GIVDLYGYVD VFNLANSSSG DKGAGKSKMF MKFAPRFSID AMTGWDLSAG
PIQEVYFSTL FNWGGGAISG VDADGNEHGG DVNMSFWGLG ADVMVPWLGK TGMNLYATYD
MNAKDWNGYQ FSMNWFKPVM NFDNGSFVSF QGYVDYQFGA DAVDDMYVPT TSSGGAAYFG
LHWHSDNYAL GYGLKAYQDV YLVKDDGGIV GLESTGFAHY FTATYKF
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