| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2511 |
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| Symbol | |
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| ID | 5662904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3059563 |
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| End bp | 3060438 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641237137 |
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| Product | DNA ligase |
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| Protein accession | YP_001502366 |
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| Protein GI | 157962332 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATCAA TTCGGTTTAT CAATTCATTT CTCAGGCTTT GTTTAATCAG CCTCATCACT
GTCAATTATA GCTACGCCAA TAACACAGAC ATTCGAACTC CAAATAAACC TGCTATTCAA
CTTGCATCTG CATTCGACGA GTCAATTTCG GATATAACGC AATACTTGGT GAGCGAAAAA
CTCGATGGTG TTAGGGGCTA CTGGGATGGC AAAGTGATGT ACAGCCGTTC CGGCCGCCAA
ATTGCATTAC CCGATTGGTT TGTAGCGGGC TTTCCTAGCT ACCCTTTAGA TGGTGAGTTA
TGGATTAAAC GAGGGATGTT TGAGCAAGTA TCGGCAATGG TTAGAAGCTC CAAGGTGAGT
GATGAAGAGT GGGCCAGAGT TAAATTTATG ATTTTTGACT TACCCGCCGA GTCCAGTGTT
TTTGAATTGC GCTACCGAAA GGCTGTAAAA GAATTGGCTG GTATCAGTCC ATACTTAAAG
GTGATTGGTC AAAATCAGTT CGATAGTTTT CAGGCGTTAG AGGCAGAGTT ACAGAAGGTC
ATTGCGAAAA ACGGTGAAGG ACTCATGCTT CATAAGAAAC ATGCTTTTTA TAAATCAGGT
CGTAGCAAAG ACATAGTTAA ACTAAAACCT TTTTATGATG CTGAAGCAAG AGTCATAGGT
TATACGTCTG GTAAGGGGCG TTTTAGTGGC ATGATGGGAG CCTTGGTGGT TAAAAATCAG
CAGGGGATCA CATTCAACTT AGGAACAGGG TTCAGTAAAG AACAAAGGCA GAGTCCACCA
CAGATTGGCA GCTTAGTGAC ATATAAGTAT TACGGGCTGA CACAAAAAGG TACACCAAGA
TTTGCGAGCT TTTTAAGGGT GAGACATGCT AAATAG
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| Protein sequence | MLSIRFINSF LRLCLISLIT VNYSYANNTD IRTPNKPAIQ LASAFDESIS DITQYLVSEK
LDGVRGYWDG KVMYSRSGRQ IALPDWFVAG FPSYPLDGEL WIKRGMFEQV SAMVRSSKVS
DEEWARVKFM IFDLPAESSV FELRYRKAVK ELAGISPYLK VIGQNQFDSF QALEAELQKV
IAKNGEGLML HKKHAFYKSG RSKDIVKLKP FYDAEARVIG YTSGKGRFSG MMGALVVKNQ
QGITFNLGTG FSKEQRQSPP QIGSLVTYKY YGLTQKGTPR FASFLRVRHA K
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