| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2406 |
|---|
| Symbol | |
|---|
| ID | 5662799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 2934626 |
|---|
| End bp | 2935417 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641237032 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_001502261 |
|---|
| Protein GI | 157962227 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000139632 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACATA TCACTCCATT AGCCGCGTTC AATGATAATT ATATCTGGGT GTTCCAATCT
CAGCAAAATA CTGGTGCCGA AAGTAGTGGC ATCTACGTCG TAGATCCTGG TGATGGCCAA
GTTGTCATCG ACTACTTAAT CCAAACAGGA CAGGCACTGC TAGGCATACT CATCACCCAC
CATCATCATG ATCACACCGG TGGGATCGAA CAGTTGATCC GTCGATTTGG TGCACAAATT
GCCGTTTATG GACCGCAAAG CGAGAATATT ATCGGTGTAA ATCACCCTAT CGTGGCAAAC
GGTGACATCT CCCTCACAAA TGCAGGTTTA AATGCAAAAG TTATTCAGCT ACCCGGCCAT
ACCTTAGGTC ATATCGCTTA TTTAATCGAA GATGTTCTAT TTTGTGGTGA TACTCTGTTT
AGTGCTGGCT GTGGTCGTAT TTTTGAAGGC AGTGCCGAGC AGATGTACCA ATCACTCAGT
GAGCTAGGTC AGCTGCCTGA CAATACCAAA GTTTGCTGTG CTCACGAATA CACCATAGCG
AATCTAGCAT TTGCTAACAG GGTTGAGCCT AATAATGCAG CCCTCATAGA TTACACAAAA
AAAGCCCAAG CCCTTCGAGC TCAAAATCTG CCGACCTTGC CTTCATCAAT TGGACAGGAA
AAGGCGATTA ACCCCTTTTT AAGAAGCGAT AGTGAAGAAA TTTGCCAATC TTTATCCATT
CAATTCCAAC AACCTATCAA TAATCCATTG CAAAGCTTCT CACTTCTACG CCAATGGAAA
GACAATTTCT AA
|
|---|
| Protein sequence | MLHITPLAAF NDNYIWVFQS QQNTGAESSG IYVVDPGDGQ VVIDYLIQTG QALLGILITH
HHHDHTGGIE QLIRRFGAQI AVYGPQSENI IGVNHPIVAN GDISLTNAGL NAKVIQLPGH
TLGHIAYLIE DVLFCGDTLF SAGCGRIFEG SAEQMYQSLS ELGQLPDNTK VCCAHEYTIA
NLAFANRVEP NNAALIDYTK KAQALRAQNL PTLPSSIGQE KAINPFLRSD SEEICQSLSI
QFQQPINNPL QSFSLLRQWK DNF
|
|---|
| |