Gene Spea_0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0799 
Symbol 
ID5661198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp988272 
End bp989000 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content44% 
IMG OID641235344 
Productintegrase catalytic region 
Protein accessionYP_001500661 
Protein GI157960627 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCATGT ATTGGCGCCA GTTTATGCCT AGAGTGGGGA CGCGCAAGCT CTACCAGCTC 
ATCAAGCCAC AACTGATAGA ACAAGGGATA AAGCTCGGTA GAGATGGGTT ATTTCAGTAT
TTGAAGCAAC AAAATATGCT GGTAAAACCC AGAAAAAATT ACACTAAAAC GACCAATAGC
CATCACTGGC TAAGAAAGTA TCCCAACTTA CTAAAAGACA GAGCGGTCAA GCGTGTTGAA
GAGGTGCTCG TTAGCGATAT CACCTACGTG AAATCAGATG AGGGGACGCA CTATTTGTCT
CTGGTAACAG ATGCGTACTC AAGAAAGATA ATGGGATATG AGTTAAGCCA TGAAATGAAA
GCTTGTGACG TGGTCAAAGC ATTGAATATG ACGATAAAGA ATCGTCAGAC AACAGGCGAT
GCCATTCACC ACTCAGATAG AGGGATGCAG TACTGCTCAG CTGAGTACCA GGAGACGTTA
GCGGCAAATG GTATTACTCC GTCCATGACA GATGGATATG ACTGCTACCA AAATGCACTT
GCAGAGCGGG TTAATGGGAT TTTGAAGCAC GAGTTTTTGC TTTATCGCTG CCGTACGATG
AAGGAGCTCG ATATGTTAAT CAAAGAGTCG ATAGAGACTT ATAACCATTT AAGGCCGCAT
CTTAGTTTAG GGATGAAAAC CCCTAATGAA GTACATAAAA AAGCCAGTCG GGAGTTCCAA
CTGGCTTAA
 
Protein sequence
MVMYWRQFMP RVGTRKLYQL IKPQLIEQGI KLGRDGLFQY LKQQNMLVKP RKNYTKTTNS 
HHWLRKYPNL LKDRAVKRVE EVLVSDITYV KSDEGTHYLS LVTDAYSRKI MGYELSHEMK
ACDVVKALNM TIKNRQTTGD AIHHSDRGMQ YCSAEYQETL AANGITPSMT DGYDCYQNAL
AERVNGILKH EFLLYRCRTM KELDMLIKES IETYNHLRPH LSLGMKTPNE VHKKASREFQ
LA