Gene Spea_0450 details

Gene Information

• Locus tag: Spea_0450
• ID: 5660850
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 558677
• End bp: 560740
• Gene Length: 2064 bp
• Protein Length: 687 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641234988
• Product: hypothetical protein
• Protein accession: YP_001500313
• Protein GI: 157960279
• TIGRFAM ID: [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAT TTAATAAATG CAAAGCGGCG CTTATTGTCG CCGCGGCTTT CGGTCTAGCA 
GCCTGTAGCG ACGGTAAAGA TGGTAGTGAC GGTGAAGATG GCACCAGCCC ATTACCGCCG 
ATAGTCGAAG CTACAGAGAT CACCAATGTT GAAGTGCTAA GTCATACTCT TGAAGAGGGC 
GCAGTGCGCT TTGAGTTTGA AGTGACTAAC GAAGAAGGCT TGCTGGTTAG CGGTCTTGAA 
AAAGTGAATG CAGAAGTTGC AGAGTTAACT GATAAAGGTA TTGCTCGTAG TCGCCCAGAA 
TTTGAGGGCA CCATTGCCGG TGGTAGTGCA TCAGAGGAGA CCGATGGTGC TAGCCTGACC 
ATGACTGCAG ATGGTCGTTA TGAATTTCTA GCACCAATGC CAGCAGTTAA TGCAGGTACT 
GAAGGTATAA TCCGACTGGC CGTTGGTGGC GGTGAGAAGA TCGCTAAATC AAACTACATT 
CTAGTCGACA AGTCAGAGGG CCTTCATACG ACCTCTACGG CAACCTGCCA TACTTGTCAT 
GTCGACTACG CCGCATCGAA CTTAAAACAT CCAAGCTATA CCGCAATTAA TACCGATGGT 
GAAACCGATC TGGTCGCAGG TTGTATGGTC TGCCACGGAA ACGTGGTGCG CGATGACGGC 
GGATACGCGC GTAATTCAAT GCAGAAGATT GGTCATATCA ATCATCAGAA ATTTGAAAAG 
GATTTCGAGC CAGCTAACTG TTACAGCTGT CATGCTGAGC CTATCACTAA GGTAAACAGT 
ATGAGTACTT GTACTGACTG TCATGATGCC GCAGGTGTAG GTTCTGCTGC GGTTGCAATG 
ACCTACAGCA CATTCGATGA GTCAGATGAT GTGCGCTTGT TCCATAAGAA GGTGGGTGAG 
CGAGCCGATA TTAGAGCGCA GCATTACACA ACCACTTCTG CGCCTTACAC AAACAGCAGT 
TTGGAGTGGG ATGACCATGA AACCACAGGT GGTTGGTGTA CCGATATCGC ACTGTTTAAT 
ACCGATGCGG AAACCCCTGT TCAGCTCAAT ATTGCCCAGT TATATGCCGC AGGCACGTTA 
ACTTATGCCG GAGCGTATAT TCACGCATAC CATAATGATT CCATTGTGGG TCGCCCAAGC 
CCACGAGATT CAGGTGGTGT CACAAATAGT CAGTACGTTG AAAAGTCAGA TGGCTCTAGA 
GCCGTGTGTT ATGTGCGCCT TGATGGCATC GATACCGGCT TCGCTAATGC CGGCTTTACT 
GCTAGCTCAA GGGTGACTTT CAAGCAGCAA GATGATGATG GCGGCTATGA CGGTGTCTCA 
CTCACTAGTT ACTCTGATGT TGTCGATAGC AACGAGGAAA AACTTCAAGA GTATGAGCGC 
CGTCATAGTG TCACTTTAGA TAGCTGTACC ACTTGTCACA ACAACGAAAC CAACTATCAC 
AAGAATGGTA GCTACAATGA TGGTGGTCTA GATTGTGTGG CTTGCCATAA CAATGGTCAA 
GATCGTGCAG GCCAGCGAGT GGTAGGCCTA GATGCTTTCG CAACTGACAG CTTCCGCATT 
AATGCGGGCT ACACCATTGC TGCAATCAGT GGTGGTGAAC AAGTTGGTTG GAAGGCCAAT 
AGTGCGCCAG GCTTTGGTCC TTTAGTGCAT GCCCAGCATT GGGGGCTGCA ATCTGTTATT 
GGCTCGGAGA TGAGTCGAGA TAATGAGATT GCGGTAACCA ATTCTGCGGC CAAGCTGAAC 
GCCGATAACT GTGTCTCTTG TCATGCCGAT GGCATCGATC TTAACGCGGT GCCGAATCAA 
TACATGCTAT CTAGAGCCTT CAACGGTGGA GATGCTGGAG AGTCAGGTGT TGCCTCAAGT 
CCTATTACCG CTAACTGTTT TGCTTGTCAT AACAACGACC AAGCGCTTAA CCATATGATT 
TCAAACGGTG GAGAGCTTAA CCTTGAAGTT GATAAGACAA GTGATTGGTT TACTCAACCA 
ACCTCTGAGT CTTGTGCGAC TTGTCATGCA GAAGGGCGCT CGTACGGGAT CGAGAAGTAT 
CACGTATTTG ACCGTAAAGA ATAA 

 

Protein sequence

MRKFNKCKAA LIVAAAFGLA ACSDGKDGSD GEDGTSPLPP IVEATEITNV EVLSHTLEEG 
AVRFEFEVTN EEGLLVSGLE KVNAEVAELT DKGIARSRPE FEGTIAGGSA SEETDGASLT 
MTADGRYEFL APMPAVNAGT EGIIRLAVGG GEKIAKSNYI LVDKSEGLHT TSTATCHTCH 
VDYAASNLKH PSYTAINTDG ETDLVAGCMV CHGNVVRDDG GYARNSMQKI GHINHQKFEK 
DFEPANCYSC HAEPITKVNS MSTCTDCHDA AGVGSAAVAM TYSTFDESDD VRLFHKKVGE 
RADIRAQHYT TTSAPYTNSS LEWDDHETTG GWCTDIALFN TDAETPVQLN IAQLYAAGTL 
TYAGAYIHAY HNDSIVGRPS PRDSGGVTNS QYVEKSDGSR AVCYVRLDGI DTGFANAGFT 
ASSRVTFKQQ DDDGGYDGVS LTSYSDVVDS NEEKLQEYER RHSVTLDSCT TCHNNETNYH 
KNGSYNDGGL DCVACHNNGQ DRAGQRVVGL DAFATDSFRI NAGYTIAAIS GGEQVGWKAN 
SAPGFGPLVH AQHWGLQSVI GSEMSRDNEI AVTNSAAKLN ADNCVSCHAD GIDLNAVPNQ 
YMLSRAFNGG DAGESGVASS PITANCFACH NNDQALNHMI SNGGELNLEV DKTSDWFTQP 
TSESCATCHA EGRSYGIEKY HVFDRKE