Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0279 |
Symbol | |
ID | 5660679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 311327 |
End bp | 313660 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641234809 |
Product | hypothetical protein |
Protein accession | YP_001500142 |
Protein GI | 157960108 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTAG AATCCACGTT ATTTACCTTT TCCAAATATC GCCCTGAGCT CACTCGCCCA GCGCCTTTTT TGCCTATGTC CCGTAAGGAG ATGGCAAAGC TCGGTTGGGA TAGTTGCGAC ATTATTATCG TGACTGGCGA TGCTTACGTG GATCACCCAA GCTTTGGTAT GGCCGTTATT GGCCGCATGC TGGAAGCTCA AGGTTTTAGG GTGGGGATTA TTTCCCAGCC TGATTGGTCA AACAAAGAAG ATTTTATGAA GTTAGGTAAG CCTAACCTCT ACTTTGGCGT GACCGCAGGT AACATGGACT CGATGATCAA CCGCTATACG GCCGAGCGCC GTATGCGTCA TGACGATGCA TATACCGCTG GCAACATCGG TGGTAAGCGT CCCGATCGCG CAGTAACGGT TTACACCCAG CGCTGTAAAG AAGCCTTTAA GCAGGTTCCT GTGGTAATTG GTGGTATAGA AGCCAGCTTA CGCCGTATCG CTCACTACGA TTACTGGTCC GATAAAGTGC GCCGCAGCGT GGTTTTAGAC GCCAAAGCCG ATATCTTAGT TTACGGTAAT GCCGAGCGCC CTTTAGTAGA GCTGTCGCAC CGTTTAGCCG CTGGTGAGCC TATGTCACAG CTGCATGATA TTCGTGGTAC CACGGTTATT CGTAAAGAGC CATTGCCTGA GTGGAAGGGC GTTGATTCAC GCAAAATCGA TCAACTGCAT AAGATTGACC CTATTCCTAA TCCTTATGGC GCCGATGACG TAGGTTGTAA AAACCTGTCC GGTCCAACGG ACGAGAAAAT ATTCGACAAT GATGCGCCTA AGGCGATCAG TGTTCAGCCA GCAAGACCAA AGCCGTGGGA AAAAACTTAT GTTTTACTCC CAAGCTATGA AAAGGTGTCA GAAGATAAGT ATTTATACGC CCATGCCTCG CGTATTTTGC ATCAAGAGCA AAATCCGGGA TGTGCGCGTG CGCTATTTCA AAAGCACGCC GAGCGCGCTA TTTGGGTTAA TCCGCCTGCG TGGCCACTGA ATACCGATGA GATGGATGGC GTGTTCGATC TGGCTTATCA GCGCGTACCG CACCCCTCGT ATGGCAAGGA GAAAATTCCT GCCTACGACA TGATTAAGAC TTCGATTAAT ATCATGCGAG GCTGTTTTGG TGGCTGCTCA TTCTGTTCGA TCACCGAACA TGAAGGGCGT ATTATTCAGA GTCGTTCACA AGATTCGATA GTCAAAGAAA TTAAAGACAT TCAAGAGAAG GTGCCGGGTT TTACCGGTGT TATCTCTGAT CTTGGTGGCC CGACGGCAAA CATGTATCAC TTAGGCTGCA CTAGCGTAAA GGCCGAGAGT ACCTGTCGCC GTCTATCTTG TATCTTCCCG TCTATTTGCG GTCACTTAGA TACCGACCAT CAGGCGACCA TAGATCTATA TCGCGCTGCC CGTGATATAC CGGGGATCAA GAAGGTATTG ATCGCCTCGG GTGTGCGTTA TGACTTAGCC ACCGAAGATC CTCGTTATGT GAAAGAGTTG GCGACTCATC ATGTAGGTGG TTATCTGAAG ATTGCCCCTG AGCATACCGA AGAAGGCCCG CTGAATAAGA TGATGAAGCC GGGGATGGGC ACTTACGACA AGTTTAAAGA ACTTTTCGAT AAGTACTCAC AGGAAGCGGG TAAGAAGCAG TATCTGATCC CTTACTTTAT TTCGGCGCAT CCGGGGACCA CTAACGAAGA TATGGTGAAT CTGGCTTTGT GGCTAAAGAG TGAGAAATTC AAGCTAGACC AGGTGCAGAA TTTCTACCCA TCGCCTATGG CGAATGCGAC CACGATTTAT CACACCGAGC TTAACTCGCT TAAAAACGTT AAGCACAATA GTGAACAGGT TACAGTGCCG AAGAAAGGTC GTCAGCGTAA GTTACATAAA GCCTTGCTGC GTTATCATGA CCCTGTAGGT TGGCCACTTA TTCGTGAAGC GCTTATTGCC ATGGGTAAGG AGAAGCTGAT TGGTAATGGG CCATCTTGCT TAGTACCGGT AGAGACACGC CAGGAGCGTG AAGCTAACCG CAACAACAAG AAGCTAAACA CTAAAGATGA TGGTAAAGGC AAGAAGGCGG TTACGCGCTT TTCAGCAGAT CAATTTGATG ATCGTAAAGC AGTTGGCAAG TCTGGACAGA GTATGGCTGG CGGTAATAAA GCAGGTCAGA AACAATCAGC TAAAAATAAG GCTGGTGGTG ATAAGGCGAA TCAGAACAAG GCTGCACAAG GTAAGCCTGG ACAAGCTGGC AAACGTCCAC CTAAGAAAAA TGCCTGGGGC ACCACGCCTA AGCATCAAAG GTAG
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Protein sequence | MQVESTLFTF SKYRPELTRP APFLPMSRKE MAKLGWDSCD IIIVTGDAYV DHPSFGMAVI GRMLEAQGFR VGIISQPDWS NKEDFMKLGK PNLYFGVTAG NMDSMINRYT AERRMRHDDA YTAGNIGGKR PDRAVTVYTQ RCKEAFKQVP VVIGGIEASL RRIAHYDYWS DKVRRSVVLD AKADILVYGN AERPLVELSH RLAAGEPMSQ LHDIRGTTVI RKEPLPEWKG VDSRKIDQLH KIDPIPNPYG ADDVGCKNLS GPTDEKIFDN DAPKAISVQP ARPKPWEKTY VLLPSYEKVS EDKYLYAHAS RILHQEQNPG CARALFQKHA ERAIWVNPPA WPLNTDEMDG VFDLAYQRVP HPSYGKEKIP AYDMIKTSIN IMRGCFGGCS FCSITEHEGR IIQSRSQDSI VKEIKDIQEK VPGFTGVISD LGGPTANMYH LGCTSVKAES TCRRLSCIFP SICGHLDTDH QATIDLYRAA RDIPGIKKVL IASGVRYDLA TEDPRYVKEL ATHHVGGYLK IAPEHTEEGP LNKMMKPGMG TYDKFKELFD KYSQEAGKKQ YLIPYFISAH PGTTNEDMVN LALWLKSEKF KLDQVQNFYP SPMANATTIY HTELNSLKNV KHNSEQVTVP KKGRQRKLHK ALLRYHDPVG WPLIREALIA MGKEKLIGNG PSCLVPVETR QEREANRNNK KLNTKDDGKG KKAVTRFSAD QFDDRKAVGK SGQSMAGGNK AGQKQSAKNK AGGDKANQNK AAQGKPGQAG KRPPKKNAWG TTPKHQR
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