Gene Spea_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0098 
Symbol 
ID5660499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp109605 
End bp110141 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content42% 
IMG OID641234611 
Producthypothetical protein 
Protein accessionYP_001499962 
Protein GI157959928 
COG category[S] Function unknown 
COG ID[COG3078] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTA GTAAGAAAAC GCGTAAGAGC AACGAGAATG CTCCCAAATT AGCCCCAAGA 
ACCAAGAAGA AAGATCGAGT TCTTGCAGGC AAGAAACAAG TTGCTGGCAA TAAAGCGGGA
AGTCGTCATA ACGCTTCGAT GATTGAAAGC CAAGCTAATG GCGGCAAAGC TAAAAATGCC
GATCCACGCC ATGGCAGCAA AAAACCTGTT CAACTGCATA TCAACACAGA AGTAAAAGTT
GAGAAGAAGC CTAAAGGGCC AAAACTAACT GATGAGCAGA AATTGTTGAA GCTTGAGGAA
GATCCAAGAC TCAATAGCCT ACTCGATATG CTTGAAGAAG GTAAAAACCT CAGCCAAGAC
GATCAAGCAT GGTTAAACAA GCAGTTAAAC CAGATTGAAG CACTGATGGA CAGACTTGGT
ATTAATGACG AAGAAGACGA TGAGCCGAAA AACAAAAAAG CCGTTAGTGA TGACGACTTA
TTTGATAAGT TCGAGTCTGG TGCAGATCTG TTAAAAGACT ACTTCGACAA AGACTAA
 
Protein sequence
MSRSKKTRKS NENAPKLAPR TKKKDRVLAG KKQVAGNKAG SRHNASMIES QANGGKAKNA 
DPRHGSKKPV QLHINTEVKV EKKPKGPKLT DEQKLLKLEE DPRLNSLLDM LEEGKNLSQD
DQAWLNKQLN QIEALMDRLG INDEEDDEPK NKKAVSDDDL FDKFESGADL LKDYFDKD