| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0078 |
|---|
| Symbol | |
|---|
| ID | 5660479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 88464 |
|---|
| End bp | 88922 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641234591 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001499942 |
|---|
| Protein GI | 157959908 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAGC CTGTTAGTCA GAGTAATAAG CGCGAGCTTG TTATGGGCTT AGTAAAAGGC
ATTCGGCAAG ATATCGAGGA TTATCGTCAG CTAAAAAGTC TATTGAATCG TCAGCGTGAG
CTGATGCAGC GTCGCGACAA TCAAGGTCTT AATGAGCACA ATAAGCTGCA ATCTAGCCTG
TGTAATAGCT TGATGGTTAA GGCGAGCGAT AGAGGACTGT TGTTGCAGGA CTTGGGCTTT
GCTGGAGATG CGAGTGGTAT GCAGGCGTTA ATCGCAAGGC TGCCTAAAGC CTCTTCTGAG
CAAGTGGCTA ATCTTTGGGA TAACTTGCTT GGCTTGGTCA GAGAGAGCAA ACAAATTAAC
GAAGATAATG GCAAGCTATT GGTCGCGCAG CAGGAGGTGA TTAACCAACT CCTGAACCCG
AGCAATGAGC TGGCAATTGA TTATGGTGAT CTGCGCTAA
|
|---|
| Protein sequence | MVKPVSQSNK RELVMGLVKG IRQDIEDYRQ LKSLLNRQRE LMQRRDNQGL NEHNKLQSSL
CNSLMVKASD RGLLLQDLGF AGDASGMQAL IARLPKASSE QVANLWDNLL GLVRESKQIN
EDNGKLLVAQ QEVINQLLNP SNELAIDYGD LR
|
|---|
| |