Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0062 |
Symbol | |
ID | 5660463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 74467 |
End bp | 75885 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641234575 |
Product | flagellar hook-associated 2 domain-containing protein |
Protein accession | YP_001499926 |
Protein GI | 157959892 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCAG GTATGGGTGG CGCCACATTC GCCGAACAGC TTATTGTCGC AGAGCGTGCA GGCAAAGATC AGATTTTCAA AAGCAATATG ACTAAGTATG AAGCGCAGCT TGATGCCTAT AAGATCTTAG AGCGCAGCTT AGACTCTATG AGTAGCAAGC TGGAAGCGAT TGACGGTGAT GCTTTCGAAA GTAAAACCTC ATCGGTCAGC GATGATAATG CCTCCATTTC TGTCGAAAGT GGCGCACCAA CGGGTGACTA TGACCTGCAT ATTGAGCAGC TAGCGCAAGC GCATCAAGTG ACTAAAAGCT TTGCTAGCGA GGACAGCCTA CTTCCGACTA CTGGAGTTAT TAATATCCAG CTCGGCTCAG ATCCAAGTGA CAGCATCAGC CTCGACATGT CTAAGCTCAA TGCCGGTGGC ACCGCGACAG TTAAAGATCT TACTGGCATG ATTAACTCCC ACTCTGGTAA CCCTGGAGTG CAGGCATCGT TGGTACGCAC CGGTGGCCAA GTTGAGTTAA TGCTCTCCTC TAAAGAGACT GGAGCCGCTA ACAATATCAG TGTCACCATG GATCCTATGG ATGGTACGGG CGCCAAAGAT TGGGGCATGA CCGAGCGCCG TGCCGCACAA GATGCCAAAG TAAACCTTAA TGGCATCGAT ATCGTCAGCA GCAGCAATAA CTTAGTCAAT GTCATCGATG GCGTCTCTAT CGAACTGAAT AAAGCTCATA AACCAGGTGA AAGCAGCAAC ATCAAAATTG AGTCTGATAC CGATGCTAGT GAGCAGGCCA TCGAAGACTT CGTCGATATC TTTAATGACT TGATGGATGA AATCAACAAA TTAACCCGCT CTATGGGCAG TGAAGCTTTA GATGAGCTGA ACCAAGAAAA TGCCGATAAA GATGACAATA GTGATGAAGA TAAGGAAGAC GAAGATAAAG AAGACGATGA AGATGACAGT AATTCTTCAA TCACCGAAGA TCAACTAGGC GTACTTAAGG GCGACTCTAG TATTCGCATG CTGCAACAGA ACATGCGCGA TGCCATCTTT GACGCTGCAC CTAACGGCAT GCGCTTATCA GATATTGGTG TTGAATTCGG CCGCGATGGC AAGCTCGATG TCGACAGTGA GAAACTATCT AAAGCGTTAA AAGATAACCC TAATGCCGTG CAGGACATGT TTACCGACAC GGGCAGCTAT GTCGATAAGC TCGACAAAAT CATCGAGCCA TTCACTCAAT TTCAAGGCTC GATGGATCTC AAGAAAGATA ACCTTGAAAT GCAGATCGAA CGAGTCGAAA CCAGCATGGA TAATCACGAT AGACAGATGG AGCAAAGATA CCAAATCTAT CTAGCCCAAT TCACAGCTAT GGAAGCAACC ATTAGCCAAC TTCAGTCTTC AAGCGCGCTG TTTTATTAA
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Protein sequence | MISGMGGATF AEQLIVAERA GKDQIFKSNM TKYEAQLDAY KILERSLDSM SSKLEAIDGD AFESKTSSVS DDNASISVES GAPTGDYDLH IEQLAQAHQV TKSFASEDSL LPTTGVINIQ LGSDPSDSIS LDMSKLNAGG TATVKDLTGM INSHSGNPGV QASLVRTGGQ VELMLSSKET GAANNISVTM DPMDGTGAKD WGMTERRAAQ DAKVNLNGID IVSSSNNLVN VIDGVSIELN KAHKPGESSN IKIESDTDAS EQAIEDFVDI FNDLMDEINK LTRSMGSEAL DELNQENADK DDNSDEDKED EDKEDDEDDS NSSITEDQLG VLKGDSSIRM LQQNMRDAIF DAAPNGMRLS DIGVEFGRDG KLDVDSEKLS KALKDNPNAV QDMFTDTGSY VDKLDKIIEP FTQFQGSMDL KKDNLEMQIE RVETSMDNHD RQMEQRYQIY LAQFTAMEAT ISQLQSSSAL FY
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