Gene Spea_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0062 
Symbol 
ID5660463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp74467 
End bp75885 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content46% 
IMG OID641234575 
Productflagellar hook-associated 2 domain-containing protein 
Protein accessionYP_001499926 
Protein GI157959892 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCAG GTATGGGTGG CGCCACATTC GCCGAACAGC TTATTGTCGC AGAGCGTGCA 
GGCAAAGATC AGATTTTCAA AAGCAATATG ACTAAGTATG AAGCGCAGCT TGATGCCTAT
AAGATCTTAG AGCGCAGCTT AGACTCTATG AGTAGCAAGC TGGAAGCGAT TGACGGTGAT
GCTTTCGAAA GTAAAACCTC ATCGGTCAGC GATGATAATG CCTCCATTTC TGTCGAAAGT
GGCGCACCAA CGGGTGACTA TGACCTGCAT ATTGAGCAGC TAGCGCAAGC GCATCAAGTG
ACTAAAAGCT TTGCTAGCGA GGACAGCCTA CTTCCGACTA CTGGAGTTAT TAATATCCAG
CTCGGCTCAG ATCCAAGTGA CAGCATCAGC CTCGACATGT CTAAGCTCAA TGCCGGTGGC
ACCGCGACAG TTAAAGATCT TACTGGCATG ATTAACTCCC ACTCTGGTAA CCCTGGAGTG
CAGGCATCGT TGGTACGCAC CGGTGGCCAA GTTGAGTTAA TGCTCTCCTC TAAAGAGACT
GGAGCCGCTA ACAATATCAG TGTCACCATG GATCCTATGG ATGGTACGGG CGCCAAAGAT
TGGGGCATGA CCGAGCGCCG TGCCGCACAA GATGCCAAAG TAAACCTTAA TGGCATCGAT
ATCGTCAGCA GCAGCAATAA CTTAGTCAAT GTCATCGATG GCGTCTCTAT CGAACTGAAT
AAAGCTCATA AACCAGGTGA AAGCAGCAAC ATCAAAATTG AGTCTGATAC CGATGCTAGT
GAGCAGGCCA TCGAAGACTT CGTCGATATC TTTAATGACT TGATGGATGA AATCAACAAA
TTAACCCGCT CTATGGGCAG TGAAGCTTTA GATGAGCTGA ACCAAGAAAA TGCCGATAAA
GATGACAATA GTGATGAAGA TAAGGAAGAC GAAGATAAAG AAGACGATGA AGATGACAGT
AATTCTTCAA TCACCGAAGA TCAACTAGGC GTACTTAAGG GCGACTCTAG TATTCGCATG
CTGCAACAGA ACATGCGCGA TGCCATCTTT GACGCTGCAC CTAACGGCAT GCGCTTATCA
GATATTGGTG TTGAATTCGG CCGCGATGGC AAGCTCGATG TCGACAGTGA GAAACTATCT
AAAGCGTTAA AAGATAACCC TAATGCCGTG CAGGACATGT TTACCGACAC GGGCAGCTAT
GTCGATAAGC TCGACAAAAT CATCGAGCCA TTCACTCAAT TTCAAGGCTC GATGGATCTC
AAGAAAGATA ACCTTGAAAT GCAGATCGAA CGAGTCGAAA CCAGCATGGA TAATCACGAT
AGACAGATGG AGCAAAGATA CCAAATCTAT CTAGCCCAAT TCACAGCTAT GGAAGCAACC
ATTAGCCAAC TTCAGTCTTC AAGCGCGCTG TTTTATTAA
 
Protein sequence
MISGMGGATF AEQLIVAERA GKDQIFKSNM TKYEAQLDAY KILERSLDSM SSKLEAIDGD 
AFESKTSSVS DDNASISVES GAPTGDYDLH IEQLAQAHQV TKSFASEDSL LPTTGVINIQ
LGSDPSDSIS LDMSKLNAGG TATVKDLTGM INSHSGNPGV QASLVRTGGQ VELMLSSKET
GAANNISVTM DPMDGTGAKD WGMTERRAAQ DAKVNLNGID IVSSSNNLVN VIDGVSIELN
KAHKPGESSN IKIESDTDAS EQAIEDFVDI FNDLMDEINK LTRSMGSEAL DELNQENADK
DDNSDEDKED EDKEDDEDDS NSSITEDQLG VLKGDSSIRM LQQNMRDAIF DAAPNGMRLS
DIGVEFGRDG KLDVDSEKLS KALKDNPNAV QDMFTDTGSY VDKLDKIIEP FTQFQGSMDL
KKDNLEMQIE RVETSMDNHD RQMEQRYQIY LAQFTAMEAT ISQLQSSSAL FY