Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0052 |
Symbol | |
ID | 5660453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 68035 |
End bp | 68727 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641234565 |
Product | acylneuraminate cytidylyltransferase |
Protein accession | YP_001499916 |
Protein GI | 157959882 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAA ATAAACGAGT GTTAGCTCTT ATTCCCGCAA GAGGTGGAAG TAAGAGGTTA CCTCGAAAAA ATATATTACC TTTGGCAGGC ATACCTTTAA TAGCCTGGAC GATAGACGCT GCTCTTAAAT CAAAGTATAT CGACCGAGTT GTGGTCTCTA CTGACGATGA AGAGATTATG TGTGTCAGCA AGCAATTTGG AGCCGAAGCC CCCTTTGTTA GGCCTGTTGA GCTTGCGTCA GATACTGCAA CATCTACAGA CGTCGTTCTT CATGCGTTAA ATTTTTTTAA GAATGATTTT GATGTGATTG TTTTATTGCA GCCATCGTCC CCGCTAAGGG AAGAGAGTGA TATCGATAGG GTTATTGAGC AGTTAGTCAG CCAAGACGCA AATGGTATAG TTTCAGTAAG TGAGTGTGAG CACACTCCAT TGTGGTCAAA TACTTTACCG GCTGATGGAA ACATGTCTTC ATTTATAACA AAAGATGCGC TTAAGCGTTC TCAAGATTTA AAAACATTTT ACAGGTTAAA TGGGGCGATT TATTGTTATA AGACTGATTA TTTTATAGCG AATCAAGGAG GTAGCTACGC TGATGGTGTA TATGCTTGTA TCATGAAAAA AGAAAAGTCA GTTGATATCG ATGATATAAC CGACTTTAAA TTTGCAGAGT TTCTTATTGG TCTTTATCGC TAA
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Protein sequence | MIKNKRVLAL IPARGGSKRL PRKNILPLAG IPLIAWTIDA ALKSKYIDRV VVSTDDEEIM CVSKQFGAEA PFVRPVELAS DTATSTDVVL HALNFFKNDF DVIVLLQPSS PLREESDIDR VIEQLVSQDA NGIVSVSECE HTPLWSNTLP ADGNMSSFIT KDALKRSQDL KTFYRLNGAI YCYKTDYFIA NQGGSYADGV YACIMKKEKS VDIDDITDFK FAEFLIGLYR
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