Gene Spea_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0048 
Symbol 
ID5660449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp64064 
End bp65242 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content41% 
IMG OID641234561 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001499912 
Protein GI157959878 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase
[TIGR03568] UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGA TGCATAAAAA AGTTGCGGTT TTTACAGGGA CAAGAGCTGA GTATGGTCTG 
CTCTATTGGC TTTTAAAGGA CATACAAAGC GATCCCGAGT TGACACTTCA ATTGTTAGTA
TCTGGCATGC ACTTTTCTCC AGAGTTTGGA GAGACCTATA AAGATATAGA GAAAGATGGT
TTCAATATTG ATGAAAAAAT TGAAATCTTA TTATCGTCTG ACTCGCCGGT AGGAACAGCA
AAAAGTATAG GGCTCGGTGT TCTTGGCTTT GCTGATGCAC TAGCGCGATT ACGACCAGAT
GTATTGATTA TCCTAGGTGA CCGTTTTGAA GCCCTTGCAG CCGCTCAGAC TGCGATGATA
CTGCGTATAC CAATTGTGCA CCTTCATGGT GGTGAAATAA CAGAAGGTGC TTATGATGAT
GCGATTCGTC ATGCTATTAC TAAGTTGAGT TACCTTCATG GAACTTCAAC TGAAGACTAT
CGAAATCGAG TTATTCAGTT AGGAGAGGCG CCAGAACGAG TAAAAAACAT TGGTGCAATC
GGATTAGACC ATCTGAACCG AGCGTCATTT ATGACTGTAT CAGAGTTGAG CAAATCACTC
TGTTTTGAGC TAAATAGACC ATATTTTGTA GTTACTTATC ATCCGGTAAC ACTAGGGGAA
GAAGCTCCTG AAGCGACTTT TCAGGCAATA CTAGATGCAT TAGATGAATA CTCTGAATAC
CAAGTTATAT TGACTTACCC AAATGCTGAT GATGGTGGGC GACGAATTAT TCCGATGTTA
AAAGCGTATG CATTAAGTCA ACCCAGTCGA GTATTGGCTA TTCCTTCTCT TGGGCAAGTT
CGTTACTTGA GTGCAGTAAA GCATGCTGCA GCCGTAATTG GTAACTCATC GAGCGGAATT
ATAGAGGTTC CCGCATTTGA TATTGCAACG GTAAATATTG GTGTAAGACA AAAAGGACGC
TTGGCGGCTA AAAGTGTATT GAATGCACAA CCGAATCAAC ATTCAATTTC TGAACAAATT
CAAATTGCAG TTAGGCGCAG TTATAAGCAA ATTGATGAGA AGATTTGCAA CCCTTACGGG
CAGGGAAATG CGAGCAAACA AGTTATTGAA ATGATAAAAA CACTTTCATT TGAACCAAGT
AAAGTGTTCT TCGATATCAA CTTTTCTTGC CAACAGTGA
 
Protein sequence
MTQMHKKVAV FTGTRAEYGL LYWLLKDIQS DPELTLQLLV SGMHFSPEFG ETYKDIEKDG 
FNIDEKIEIL LSSDSPVGTA KSIGLGVLGF ADALARLRPD VLIILGDRFE ALAAAQTAMI
LRIPIVHLHG GEITEGAYDD AIRHAITKLS YLHGTSTEDY RNRVIQLGEA PERVKNIGAI
GLDHLNRASF MTVSELSKSL CFELNRPYFV VTYHPVTLGE EAPEATFQAI LDALDEYSEY
QVILTYPNAD DGGRRIIPML KAYALSQPSR VLAIPSLGQV RYLSAVKHAA AVIGNSSSGI
IEVPAFDIAT VNIGVRQKGR LAAKSVLNAQ PNQHSISEQI QIAVRRSYKQ IDEKICNPYG
QGNASKQVIE MIKTLSFEPS KVFFDINFSC QQ