Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0047 |
Symbol | |
ID | 5660448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 62895 |
End bp | 64055 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641234560 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_001499911 |
Protein GI | 157959877 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGCGA CACCAATTGT TGAGTTCGTT CGAGACATAT ACAAAACTGA CGATTTTATT CCATTGCACG TACCGACGTT TAATGGCAAC GAAAAAGCTT ATGTTATGCA AACTATCGAA AGCACTTTTG TTTCTAGTGT AGGTAAGTTT GTTGATGATT TCGAACGAAA GATAGAGGCT TATACTGGTT CTGCTAAGGC GGTAGCGACA GTGAACGGTA CAGCAGCCTT GCATGCGGCA CTGTACATGG CTGGTGTTCA GCGTGATGAT TTAGTTATTA CACAAGCGTT GACCTTTGTC GCAACCTGCA ATGCCTTGCA TCATATGGGG GCTGAACCCA TCTTTGTCGA TGTTTCTCCT ATTAGCTTGG GACTTTGTCC AAAAGCTGTG GAGGCTTACC TGTGCGAGTA TGCAGAGAAA ACAGAAACAG GTTGTGTTCA CAAAGGCAGC GGGCAACGAA TCAAAGCTGT CGTGCCGATG CATACATTTG GCCATCCCGT CGAATTAGAT GAACTTAATA TTGTTTGTCG GCAGTGGAAT ATTACTTTAG TTGAAGATGC CGCTGAAAGC TTAGGCTCTT TTTACAAAGG CAAGCATACC GGCACTATTG GTGATTTTGG TGCCCTGAGT TTTAATGGTA ATAAAATTAT CACCACCGGC GGTGGCGGCA TGGTGTTATG CCAAACGGCA GAGTTTGGGG CGCGTACTAA ACACGTGACG ACCACAGCAA AAGTGCCGCA TCCGTATGAA TTCTTCCATG ATGAGCCTGG CTTTAACTAC CGCATGCCTA ATCTCAATGC TGCGTTAGGT TGTGCGCAAA TGGAAGCGCT AGAGAATTAC CTGATTCAAA AGAGACAGCT TGCTGGGTTA TATGAAGGCT TTTTCAGCGG TTCAGATTTT AAGTTTGTAA CTGAGCCAGG TTATGCACGG TCAAATTACT GGTTAAACGC GGTAATTTGC CCGGATAAGC AGAGCAGAGA GGAAGTGCTC TCTGTTACAA ATAATTCAGG TGTGATGACT CGTCCAATTT GGCAATTAAT GCATAGATTG CCAATGTTTA AAAATGCAAT GCGTGGTGAT CTCTCCTGCT CAGAGTTTGT CGAAGCTCAT TTAATAAATC TTCCAAGTAC ACCCGTTGTA CTAAATACCT CGCAGGGATA A
|
Protein sequence | MKATPIVEFV RDIYKTDDFI PLHVPTFNGN EKAYVMQTIE STFVSSVGKF VDDFERKIEA YTGSAKAVAT VNGTAALHAA LYMAGVQRDD LVITQALTFV ATCNALHHMG AEPIFVDVSP ISLGLCPKAV EAYLCEYAEK TETGCVHKGS GQRIKAVVPM HTFGHPVELD ELNIVCRQWN ITLVEDAAES LGSFYKGKHT GTIGDFGALS FNGNKIITTG GGGMVLCQTA EFGARTKHVT TTAKVPHPYE FFHDEPGFNY RMPNLNAALG CAQMEALENY LIQKRQLAGL YEGFFSGSDF KFVTEPGYAR SNYWLNAVIC PDKQSREEVL SVTNNSGVMT RPIWQLMHRL PMFKNAMRGD LSCSEFVEAH LINLPSTPVV LNTSQG
|
| |