| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0046 |
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| Symbol | |
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| ID | 5660447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 61701 |
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| End bp | 62882 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641234559 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001499910 |
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| Protein GI | 157959876 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTATCGC TAATAGGTCG AAACAATAAG CTGTTTGCTG CAGATATAAA GTGCTATGAA
GCAGAGTTAA GCCATATTGT CTCCACATCA TCATTTCTCA TTCTTGGTGG GGCAGGTTCT
ATCGGGCAAG CCGTGACGAA AGAGATCTTT AAACGCCAGC CCAAAAAGCT TCATGTTGTC
GATATCAGTG AAAACAATAT GGTCGAGCTT GTTAGGGATT TGCGAAGCTC TTTTGGTTAC
ATTGATGGTG AATTTAACAC CTATGCATTA GATATTGGTT CAATTGAATA TGATGCCTTT
ATTAAAGCTG ATGGACATTA TGACTATGTA TTAAACCTTT CCGCCCTTAA GCATGTTCGT
AGTGAAAAAG ATCCTTTTAC CTTGATGCGT ATGATTGATG TCAACATTTT TAATACTGAC
AAAACTGTAC AGCAGGCGAT AGATTCAGGT GCTAAGAAGT ACTTTTGTGT GTCTACCGAT
AAGGCCGCTA ACCCGGTTAA TATGATGGGG GCATCAAAAC GTATTATGGA GATGTTCCTG
ATGCGCAAGA GTGAGCATAT CGCCATTTCG ACCGCGCGTT TCGCTAATGT TGCCTTCTCT
GATGGTTCTC TTTTACATGG TTTTAATCAA CGTATTCAAA AGAGTCAGCC GATAGTCGCC
CCCTACGATA TCAAACGTTA CTTTGTTACT CCTGAGGAGT CTGGTGAGTT ATGTTTGATG
TCTTGTATTT TTGGTGAAAA TCGCGACATA TTCTTTCCTA AACTCAATGA AACTTTGCAC
CTTATTTCTT TCGCTGATAT AGCGGTTAAA TACCTTAATA AACTAGGTTT TGAACCTTAT
TTATGTGAAA CGGAAGATGA AGCGCGTGAG TTGGTGAAAA CATTACCCAA ACAAGGTAAA
TGGCCATGCT TATTCACTTC TAGCGATACT ACGGGTGAAA AAGACTTCGA AGAGTTCTTT
ACTGATAAAG AAACGCTAGA TATGGAGCGC TTCGACGGTT TTGGCATAAT CAAGAATGAC
CCGCTTTATC AACAAGAGTT ACTAGAGACA TTTGAGAAAA AGATAGATCA AATGAAGCTA
GAGCGTCAGT GGAGTAAAGA AGATATCGTT AAATTATTCT TCACCATGCT GCCTGAATTT
GCTCATAAAG AAACTGGTAA ATATCTAGAT AGTAAGATGT AA
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| Protein sequence | MLSLIGRNNK LFAADIKCYE AELSHIVSTS SFLILGGAGS IGQAVTKEIF KRQPKKLHVV
DISENNMVEL VRDLRSSFGY IDGEFNTYAL DIGSIEYDAF IKADGHYDYV LNLSALKHVR
SEKDPFTLMR MIDVNIFNTD KTVQQAIDSG AKKYFCVSTD KAANPVNMMG ASKRIMEMFL
MRKSEHIAIS TARFANVAFS DGSLLHGFNQ RIQKSQPIVA PYDIKRYFVT PEESGELCLM
SCIFGENRDI FFPKLNETLH LISFADIAVK YLNKLGFEPY LCETEDEARE LVKTLPKQGK
WPCLFTSSDT TGEKDFEEFF TDKETLDMER FDGFGIIKND PLYQQELLET FEKKIDQMKL
ERQWSKEDIV KLFFTMLPEF AHKETGKYLD SKM
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