| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0032 |
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| Symbol | |
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| ID | 5660433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 35245 |
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| End bp | 36333 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234539 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001499896 |
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| Protein GI | 157959862 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGT TAATATTACT TGCTTCACTT ATAATTGGTT GCACTTCTGT TTTCGCTGAT
ACTTTAACGC TAAAGTCGGG GCATCCTGAT TCTTATGTGG TTCAAAAAGG CGATACGCTT
TGGGATATCT CTGCATCTTT TCTTAACGAT CCATGGCGTT GGCCTAAGTT GTGGGGAGTC
AATCCGCAAG TAGCTAACCC CCATTTGATT TACCCCGGAG ATAGGCTGAC CATAGTTTTT
ATCGATGGTG AACCACGCCT AGTAGTTAAG CCCCATGTTA GAAAGAGTCC TCAAGGGCGT
ATTTCGGCTA AAGGTGGTGC TATTCCGGCG ATAGATCTTT CTCTTATTCA ACCCTATTTA
TTACAACATC GCGTGGTCGA TGCCGATTGG TTTGAGCTGC AGCCAAAAGT GATGGGTGGT
GAGAGTCCCT CAAATTTCCA TGTCGTTAAT GACATTATTT ATGTGCAGGG GGAGCTGACT
GTTGGCGATA AGTTTGGCGT CTACCTAGAT GGCCGTACCT TTAAGAATAG TGACGGTGAT
AACTTAGGTT TAGAAGTGAT TTTGTCTGCC TCAGGTCGAG TGGTTGAGTC TGGGCCTATC
TCCAAGGTGG AGCTGCTGAG CAGCTTGAGG GAGACCGCTG CCGGTTACCG TGTACTACCT
ATCGAAGATG ATTTGTTAAT GTCGGCGTAT TTTATGCCTC GTGCGGCAGA GTTAACTGAG
CCCGCGACGG TTCTCGCTTC GGGGAAGAGC ATTCGAGAAA TGGGTAAACT GGATGTAGTT
TACTTAGATC GTGGTGCAGT AGACGGACTC GAAACTGGGC ATGTGTTCTC AATCTTTAAA
GATGGCGACG TTGTAGTGAT CGATGGTGAT GGCATACCTG TACAGCCCCA TGATCGCAAT
CGCTACGAGA AGATGCTCGC CAATATCTCT TCTGACAGCG CAGTTAAGAT GCCGGATCTT
TACCGCGGTA AATTGATGGT GTTTAAAGTT TTCGATAAAA CCAGCATGGG TATTATCTTA
GTCAACGAGC GTCCTGTGCG AGTGGCTGAT AAGTTAGCGA TACCTGATTC GCTGTTCCGT
AGCGAGTAG
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| Protein sequence | MKRLILLASL IIGCTSVFAD TLTLKSGHPD SYVVQKGDTL WDISASFLND PWRWPKLWGV
NPQVANPHLI YPGDRLTIVF IDGEPRLVVK PHVRKSPQGR ISAKGGAIPA IDLSLIQPYL
LQHRVVDADW FELQPKVMGG ESPSNFHVVN DIIYVQGELT VGDKFGVYLD GRTFKNSDGD
NLGLEVILSA SGRVVESGPI SKVELLSSLR ETAAGYRVLP IEDDLLMSAY FMPRAAELTE
PATVLASGKS IREMGKLDVV YLDRGAVDGL ETGHVFSIFK DGDVVVIDGD GIPVQPHDRN
RYEKMLANIS SDSAVKMPDL YRGKLMVFKV FDKTSMGIIL VNERPVRVAD KLAIPDSLFR
SE
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