| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0029 |
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| Symbol | |
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| ID | 5660430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 32327 |
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| End bp | 33607 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641234536 |
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| Product | sun protein |
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| Protein accession | YP_001499893 |
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| Protein GI | 157959859 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAA GAGCTTTGGC CGCTAAGGTC GTTTTTCAGG TGCTAGAAAA AGGTATCTCA
CTTTCTGTGG CGCTACCCGA TCAGCAAAGA CATCTCGACA GTGGCAAAGA CAAGGCGCTA
CTTGCCGAGC TTTGCTATGG CGTGATGCGT CATTTGCCAC AACTAGACAA GCAAGTCAGC
GATTGCATGA GCAAGCAGAT GAAGGGTAAG CAGCGCATTG TGCACCAATT GCTGCTGATT
GGCTGCTACC AGCTGTACTT CACGCGTATT CCTAGCCACG CGGCAATATC TGAAACGGCT
GAAGCCTGTC GTCAGCTAAA GTTTGAAGGT TTAGTTAAGG TCGTTAATGG TGTCTTGCGT
AATATTCAAC GCCAAGAAAA ACCATTAGCG ACAGACAACG ACACCTTAGC CTATAACACC
CCAGCTTGGA TCATTAAGCG TTTAAAGGAT GCCTACCCTG ATAACTGGCA AAGTGTTATT
GAGCAGAGTC ACGAACGTCC GCCTATGTGG CTGCGTAACA ATCAGCAATC GCAAACCAGA
GAGACTTACC TACTAGCACT GGCTGGATTA GAGATAGAAG CGCAGGCCGG TAACAGCCCA
GACTCGATTT TATTATCTAG CCCACGTGAT GTAATGCAAC TACCAGGTTT TGAAACTGGC
GCAGCCTCGG TGCAAGATGG CGCAGCTCAA TGGGCAGCAA CGCTACTGGC ACCGCAGGGC
GACGAGCTAG TACTTGATGC TTGTGCGGCA CCCGGCGGTA AAACTTGCCA CCTGCTAGAA
CTTGCACCCA ACATTAAGCT GGTAGCGGTA GATTTCGACG CTAAACGCCT CGAACGTGTG
CAGCAAAACC TTGATAGATT GTCACTCAAA GCTGAGTTAG TGCATGGCGA TGCCGCCAAT
ATTGACTCAT GGTGGCAAGG TGACAAATTT GACCGTATCT TGCTCGATGC GCCTTGTTCG
GCAACAGGTG TTATTCGTCG TCACCCAGAT ATTAAGTGGC TAAGAAAGAA CAACGACATC
GAAGAGTTGG CGCAATTACA GTCACAAATT TTCGATCATT GCTGGAAGTG GTTAAAGCCC
GGTGGCACAC TCTTATTCGC AACATGTTCG ATTTTGCCTC AAGAAAATAA AGATCAAGTC
AGCGCCTTCT TAGCCAGAAC ACCTGATGCG ACCTTAGTGC CAATAGAAGA GCAAGCCAAC
CCAGACGATA TCGGCTGGCA GATTGTTCCA GGACAAGACA ACATGGACGG CTTTTATTAC
GCTCGCCTAG TGAAGGATTA G
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| Protein sequence | MNLRALAAKV VFQVLEKGIS LSVALPDQQR HLDSGKDKAL LAELCYGVMR HLPQLDKQVS
DCMSKQMKGK QRIVHQLLLI GCYQLYFTRI PSHAAISETA EACRQLKFEG LVKVVNGVLR
NIQRQEKPLA TDNDTLAYNT PAWIIKRLKD AYPDNWQSVI EQSHERPPMW LRNNQQSQTR
ETYLLALAGL EIEAQAGNSP DSILLSSPRD VMQLPGFETG AASVQDGAAQ WAATLLAPQG
DELVLDACAA PGGKTCHLLE LAPNIKLVAV DFDAKRLERV QQNLDRLSLK AELVHGDAAN
IDSWWQGDKF DRILLDAPCS ATGVIRRHPD IKWLRKNNDI EELAQLQSQI FDHCWKWLKP
GGTLLFATCS ILPQENKDQV SAFLARTPDA TLVPIEEQAN PDDIGWQIVP GQDNMDGFYY
ARLVKD
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