Gene Spea_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0015 
Symbol 
ID5660416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp17680 
End bp18432 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content40% 
IMG OID641234522 
Productintegrase catalytic region 
Protein accessionYP_001499879 
Protein GI157959845 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAG CCCCTGTAAG AGCGATGATA CTAGATATCC GTCGGTTTAT GCCTCGGATT 
GGTGGCAAGA AACTCTACTT TTTACTTAAA CCTAAGTTCA TCGAGAAAGG GATTAAACTT
GGGCGCGATA ACTTCTTTAG TTACTTGAAA AGTGAAGGCT TGTTAGTCAA ACCTAAGCGT
AATTATACCA AGACGACTAA CAGTAAACAT TGGATGAAGA AACATCCAAA TTTACTGAAA
GAGTTAGTGC CAACAGCACC TGAAGAGGTG TTTGTTAGTG ATATAACATA TGTGCAATCA
GAGCAAGGCA TACATTATCT ATCATTGGTA ACTGACGCGT TCAGTCGTAA AATAATGGGA
TATGAATTAA GTAATGAAAT GAAAGCTACA GACGTAGTCA AAGCGTTAGA AATGACGATA
AGTAATCGGC AGTATCAACA TCGAGCAGTG CATCACTCAG ACAGAGGGTT ACAGTATTGC
TCTGCCGTTT ATCAGTTAGC GTTGCAAAGA AGTGACATCC GCGCATCAAT GACCGATGGA
TATGACTGCT ACCAAAACGC ACTAGCAGAA CGTATAAATG GGATATTAAA GCAAGAGTTT
CTATTATCTC CTTGCTGCAA CCTTAATGAG TTAAAGCAAC TCGTTGAGGA GTCAATTTTT
ATATACAATG AGCTGAGACC GCACTTAAGC TTGGGTATGA AAACACCTAA TCAAGTGCAT
AAAAAAGACC AGCAGCAGAA GCTACTGGTC TAG
 
Protein sequence
MELAPVRAMI LDIRRFMPRI GGKKLYFLLK PKFIEKGIKL GRDNFFSYLK SEGLLVKPKR 
NYTKTTNSKH WMKKHPNLLK ELVPTAPEEV FVSDITYVQS EQGIHYLSLV TDAFSRKIMG
YELSNEMKAT DVVKALEMTI SNRQYQHRAV HHSDRGLQYC SAVYQLALQR SDIRASMTDG
YDCYQNALAE RINGILKQEF LLSPCCNLNE LKQLVEESIF IYNELRPHLS LGMKTPNQVH
KKDQQQKLLV