| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0010 |
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| Symbol | |
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| ID | 5660411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 12160 |
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| End bp | 15360 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641234517 |
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| Product | amidohydrolase |
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| Protein accession | YP_001499874 |
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| Protein GI | 157959840 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAA ACAAATTAAC TCCCCTATAT GCTGCCATCG CATTAAGCCT TAGTGTTCCA
GTCGCTGCAG AAGATAACAA AGCTTGGCAA GTCAATACAC CAGCAGATGC ACCTTTAGAA
CAAATTAAAA TTGAAGTCGA TGAAGGCACC TGGATGAATG TCAGTGTCAG CCCGAATGGC
AAACATGTGG TGTTCGACTT ACTCGGTGAT ATTTATCAAA TGCCAATTGC TGGCGGCGAA
GCAAAGCCAT TAGCCAAAGG CATCGCATGG CAGATGCAGC CGGTTTATAG CCCTGATGGC
AAGTATATCG CCTTTACCTC AGATGAAGAT GGTGGTGACA ACATTTGGGT TATGCAAGCC
GATGGTAGTA ATCCTCGCCC AGTCACCAAA GAAACTTTCC GCTTATTGAA CAGTCCAGCT
TGGAGCCCGG ATGGGCAATA CCTAGTAGCG CGTAAGCACT TTACTGGTAG TCGTAGCTTA
GGTGCTGGAG AAGTATGGAT GTATCACGTT GCCGGTGGTG ACGGTGTAAA ACTTACCGAG
CGCCCAAATG AGCAAAAAGA CTTAGGTGAG CCAGCCTACT CACCAGATGG GCACTATATC
TATTTTAGCC AAGATTCGAC TCCCGGTAAG ACATTCCACT ACTCAAAAGA CTCGGTAAAA
GGCATCTATA AGATTAAACG TTACGATACC CAGACGGGTG ATATCGAAGT ATTAATCCAG
GGAACTGGCG GTGCGATTAG ACCAACACCA AGTCCTGACG GTAACAAGCT GGCCTACATT
AAGCGTGATG GTTTCCAGTC TTCACTCTAT TTGCTCGACC TAAAGTCTGG CGAAACTGAA
AAGTTATATG GCGAACTAGA CCGAGACATG CAAGAAACTT GGGCTATCCA TGGTGTGTAT
CCAACTATGA GCTGGACCAC CGATAATAAT GAAATCCTGT TTTGGGCGAA CGGTAAGATC
AACAAGCTTG ATGTTGAATC TAAGTCAGTA GCACAAATTC CATTTACGAT TAAGACCGAG
CGCGCCATCC AACCAGCTGT TCGATTTACC CAAGATCTTG ATAAAGATGT GTTCGACGTG
AAGATGCTGC GCATGGCGCA AGTATCTCCT GACGGCAAAA AAGTCGCTTT TGAAGCCCTA
GGCAAAATTT GGGTTAAGAG CTTACCCGAC GGCAAAATGT CACGCCTAAC AAAATTGGAT
AGCGACCTAC GCGAGTTATT CCCACAGTGG TCTCGTGACG GCAAGAAAGT CGTATTCACC
ACTTGGGATG ACCAAGAGCA AGGCACTGTT AGTTTGGCGA ACGTGCGCAA TAAGCGGGTT
AAGGTATTAA CGGATGAGCC GGGTAAATAT GTAGAACCCA CCTTCTCTCC AGATGGGGAA
ACCGTGGTTT ACCGTAAAGC CAAAGGAGGT TACATCACGC CTCGTACTTG GTCACAAGAA
ACCGGACTTT ACCAAGTAGA CATCGATGGT GACAAAAATA CTAAGATCAC CTCTGCAGGT
TATCAGCCAC AATTTGGTGC CGATAATGAC CGTGTCTACT TTATGGAAAG CGGTGAAACA
CCACAGCTTG CATCTATTGG ACTCAATGGT TTCGAAAAAC GCGTACACTA CACCAGTAAA
CACGCTACCG AATTCAGAGT CTCACCAGAC GGTAAACAGC TAGCCTTTGC CGAACGCTTT
AAAGTATTCG TTACTCCCTT TGCCAAGCAT GGCGAGACAA TTAAAATTGG GCCTAAGGCA
AGTAACCTCC CTGTTGAACA GCTAAGTGTT CGCGCAGGTG AAAGCATCAG CTGGAATACC
GACAGCAACC AGCTTTACTG GACTCTTGGC CCAGAGCTTT ATCAAGTGAA TGTTGATACC
CAGTATCAAC AACAGGCTGA AGACGCTGAA ATAACTAAAG TAGAGCCTAG CATTACCGAT
CTTGGTTTCA CTCAAAAAGC AGATGTTCCA CGTGGAACAA TTGCCTTTGT TGGTGGCAAC
ATCATTACGA TGGAAAACGA TGAAGTTATC GAAAATGGCA CTGTAATCGT TAAAGACAAT
CACATTGTCA GTGTCGGTCC AGCTTCAGTT ATCGATATTC CAAGCGATGC TAAGGTTATC
GATATCAAAG GCAAAACCTT AATGCCAGGT TTGTTCGATG CCCATGCTCA TGGTGCTCAA
GGTGAGAATG AGATCATCCC GCAACAGAAC TGGGAGCTGT ACTCAAATCT ATCTTTAGGT
GTTACTGCGA TTCATGATCC ATCAAACGAC ACCACTGAAA TCTTCGCCTC TTCTGAGCAA
CAGAAAGCCG GTAATATTGC TGGGCCTCGT ATATTCTCAA CCGGTACGAT TTTATATGGC
GCGAACCTAC CAGGTTATAC CTCTCATATA GATTCGCTAG ATGACGCCAA GTTTCACTTA
GAGCGCTTGA AAAAAGTTGG CGCGTTCAGC GTAAAGAGCT ATAACCAGCC TCGCCGTAAC
CAACGCCAGC AAGTTATCGC AGCCGCTCGT GAGCTAGAGA TGATGGTAGT GCCTGAAGGT
GGCAGTTTGT TGCAACACAA CTTAACCATG ATAGCCGATG GACACACAGG TATTGAGCAC
TCACTACCTG CGGCCAATAT CTATGACGAT ATTAAGCAGT TCTGGGGCCA AACAGATGTT
GGTTACACGC CAACCCTAGT TGTCGCCTAT GGCGGTATTT CTGGCGAAAA CTACTGGTAC
GACAAAACTG ATGTCTGGGC TCACCCCCGC CTTTCTATGT ATGTACCATC AGACATTTTG
GACGCTCGCT CAATGCGTCG CCCAACTGCA CCTGATGAAC ATTACAACCA TTTTAACGTT
GCACGCGTAG CTAACGAATT AAATGAAGTG GGTATCAAAG CCAACATTGG TGCTCATGGT
CAGCGTGAAG GTTTAGCGGC TCATTGGGAG ATGTGGATGT TTGCCCAAGG TGGCATGAGT
AATATGGAAG TATTAAAAAC GGCAACCATT AACCCAGCTA AGCACTTTGC CATGGATCAT
CAAATAGGTT CTATCAAACA AGGTAAGCTC GCAGACCTGA TTGTTATCGA TGGTAATCCT
CTGGAAGATA TTCGCGTAAC CGACCGAGTA ACTTACACCA TGGTAAACGG CAAACTGTTT
AATGCAGAAA CCATGGACCA GTTAAATGGT GGTGCCAAAA ACAAAGGCAA GCAGAGACAA
GCGTTCTTTT TTGAAAAATA A
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| Protein sequence | MLKNKLTPLY AAIALSLSVP VAAEDNKAWQ VNTPADAPLE QIKIEVDEGT WMNVSVSPNG
KHVVFDLLGD IYQMPIAGGE AKPLAKGIAW QMQPVYSPDG KYIAFTSDED GGDNIWVMQA
DGSNPRPVTK ETFRLLNSPA WSPDGQYLVA RKHFTGSRSL GAGEVWMYHV AGGDGVKLTE
RPNEQKDLGE PAYSPDGHYI YFSQDSTPGK TFHYSKDSVK GIYKIKRYDT QTGDIEVLIQ
GTGGAIRPTP SPDGNKLAYI KRDGFQSSLY LLDLKSGETE KLYGELDRDM QETWAIHGVY
PTMSWTTDNN EILFWANGKI NKLDVESKSV AQIPFTIKTE RAIQPAVRFT QDLDKDVFDV
KMLRMAQVSP DGKKVAFEAL GKIWVKSLPD GKMSRLTKLD SDLRELFPQW SRDGKKVVFT
TWDDQEQGTV SLANVRNKRV KVLTDEPGKY VEPTFSPDGE TVVYRKAKGG YITPRTWSQE
TGLYQVDIDG DKNTKITSAG YQPQFGADND RVYFMESGET PQLASIGLNG FEKRVHYTSK
HATEFRVSPD GKQLAFAERF KVFVTPFAKH GETIKIGPKA SNLPVEQLSV RAGESISWNT
DSNQLYWTLG PELYQVNVDT QYQQQAEDAE ITKVEPSITD LGFTQKADVP RGTIAFVGGN
IITMENDEVI ENGTVIVKDN HIVSVGPASV IDIPSDAKVI DIKGKTLMPG LFDAHAHGAQ
GENEIIPQQN WELYSNLSLG VTAIHDPSND TTEIFASSEQ QKAGNIAGPR IFSTGTILYG
ANLPGYTSHI DSLDDAKFHL ERLKKVGAFS VKSYNQPRRN QRQQVIAAAR ELEMMVVPEG
GSLLQHNLTM IADGHTGIEH SLPAANIYDD IKQFWGQTDV GYTPTLVVAY GGISGENYWY
DKTDVWAHPR LSMYVPSDIL DARSMRRPTA PDEHYNHFNV ARVANELNEV GIKANIGAHG
QREGLAAHWE MWMFAQGGMS NMEVLKTATI NPAKHFAMDH QIGSIKQGKL ADLIVIDGNP
LEDIRVTDRV TYTMVNGKLF NAETMDQLNG GAKNKGKQRQ AFFFEK
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