Gene Spea_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0008 
Symbol 
ID5660409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp10686 
End bp11246 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content41% 
IMG OID641234515 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_001499872 
Protein GI157959838 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTAA CGCGTTGTGG CTGGGTTAGT AACGATCCCA TTTATCAAGA GTACCATGAC 
AGGGTGTGGG GAAGGCCTGT TTATGATAGC CAAGAGTTAT TTGCGAAGCT TTGTCTCGAC 
GGTCAGCAGG CGGGTTTATC TTGGATTACC ATACTAAAGA AACAGCAAAA TTATGAGGCT 
GCATTTGCTA ATTTTGATCC TAAAGTTATC GCAACTTTTG ATGATGCAAA AATAGAGGAA 
TTACTGCAAA ACCCTGGCAT TGTACGTAAT AGGCTTAAGG TTAATTCGAT CATAAAAAAT 
GCTAAAGGCT ATATGGCTTA TGTCGAGCAG GGTAATGATT TTTCAGCGTT TTTGTGGAGC 
TTTGTAGGGG GCGCGCCAAA GACTAATCAT TTTATATCAA TGAATGAATT ACCTGTACAG 
ACCCCAGAGT CAGAAGCCAT GTCTAAGGCC TTAAAGAAGA TGGGTTTTAA CTTCGTCGGC 
CCCACTATTT GTTATGCCTT TATGCAAGCC GTTGGCATGG TAAATGACCA CACCACGGAC 
TGTTTTTGTT ATCAAAAATA A
 
Protein sequence
MEVTRCGWVS NDPIYQEYHD RVWGRPVYDS QELFAKLCLD GQQAGLSWIT ILKKQQNYEA 
AFANFDPKVI ATFDDAKIEE LLQNPGIVRN RLKVNSIIKN AKGYMAYVEQ GNDFSAFLWS 
FVGGAPKTNH FISMNELPVQ TPESEAMSKA LKKMGFNFVG PTICYAFMQA VGMVNDHTTD 
CFCYQK