Gene Spea_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0002 
Symbol 
ID5660403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1628 
End bp2728 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content46% 
IMG OID641234509 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_001499866 
Protein GI157959832 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.67756e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCT CAATTGATAG GGACGCCTTA CTAAAACCGC TGCAATTAGT CAGTGGTGCT 
GTAGAGAGGC GACATAACTT GCCTATACTG GCAAACCTTT TGGTTGAAGT GAGTAATCAC
TCACTTAAGT TAACTGGAAC CGATTTAGAA GTCGAGTTAG TCGGCGAAGT TCAGCTCGAA
GGTGAGATCC TTGAGGGGCG TACCACGGTC CCAGCGAAAA AATTTTTAGA TATTGTTAAG
TCGCTACCTG ATCAGGTAGA GCTTAAGATT GAGCAGCAAG AAAACCGTCT GTTGTTACGT
TCGGGTCGTA GCCGTTTTAC TTTGGCGACC TTGCCTGCTG AAGAGTATCC AAATGTCGAT
GCCTTTGAGG CTGAGATTGA GTTTACCTTG AAGCAGGGCA CCATGAAGTC GTTGATCGAC
GCGACTCAGT TCTCTATGGC TAACCAGGAC GTGCGTTATT ACCTTAACGG ACTGTTATTG
GAAACCGAAG GCAATGTGCT GCGTGCGATT GCGACTGACG GGCACCGTTT GGCATTGAGC
CATCGAATGA TCGAGGCGTC ACTGCCTGAA AAGCAAGTGA TTGTGCCCCG CAAGGGCGTA
TTAGAGCTTA TGCGTTCGTT TGAAGCAGAC GATCTCGACG TAACGATTGC GATTGGTGAC
AATGCGATTA GAGCGACAAC GGCAACAGCA GTGTTTACCA GTAAACTTGT TGATGGGCGT
TTTCCTGATT ATCGTCGTGT ACTGCCAAAG GGTGGCGATA AAGTTGTTAT TGCGAGCCGA
TTACAGCTAA AACAAGCGTT ACTGCGCGCT TCTATTCTGT CGAATGAGAA GTTCCGTGGT
GTTCGTGTCC AGCTGGAAAA CAATTTAATC AAGATCACCG CTAATAACCC TGAACAGGAA
GAAGCGGAAG AGATCTTAGA TGTTGAATAT GAAAATACAC CATTAGAGAT AGGTTTTAAC
GTCAGTTACT TACTCGACGT TCTCAATAAT CTACCTTCAG ATGATGTACG CATTACCTTG
ATAGACGGTA ACTCAAGCGC GCTTATCGAC AACCACATAG AGCAAGATTC TATGTATGTT
GTTATGCCTA TGCGTTTGTA G
 
Protein sequence
MKFSIDRDAL LKPLQLVSGA VERRHNLPIL ANLLVEVSNH SLKLTGTDLE VELVGEVQLE 
GEILEGRTTV PAKKFLDIVK SLPDQVELKI EQQENRLLLR SGRSRFTLAT LPAEEYPNVD
AFEAEIEFTL KQGTMKSLID ATQFSMANQD VRYYLNGLLL ETEGNVLRAI ATDGHRLALS
HRMIEASLPE KQVIVPRKGV LELMRSFEAD DLDVTIAIGD NAIRATTATA VFTSKLVDGR
FPDYRRVLPK GGDKVVIASR LQLKQALLRA SILSNEKFRG VRVQLENNLI KITANNPEQE
EAEEILDVEY ENTPLEIGFN VSYLLDVLNN LPSDDVRITL IDGNSSALID NHIEQDSMYV
VMPMRL