Gene Snas_6474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6474 
Symbol 
ID8887700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6829708 
End bp6831297 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content67% 
IMG OID 
Productcell cycle protein 
Protein accessionYP_003515182 
Protein GI291303904 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0132298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCG CGAGCCCCGC CCGGGTGCCA ACCCGCCGGA ACACCGAACT GGCCTTGCTG 
CTGGTGGCGG TGCTGGTGCT CTTCGTCTTC GAGATCGCCG TCGAGATGAA GCTCACCGGT
GGCATCCAGA CCACCGCCTA CACCCTGGTC GGAACGATCG CGGCCATGTT CGTCGTGGCC
CATCTGCTGG TGCGGGTGTT CGCGCCCTAC GCCGACCCGG TGATCCTGCC CGCGGGCGGA
CTGCTGACCG GTATCGGCAT CATCTTCATC CGGCGGCTGG ACCTCAGCTC GTTCAAGTTC
GTCGACGGCA TCAAGAAGTT CACCTACGAG GACGACGCCG AACGGGCCGC GGTGGGGATC
TTCTCCGGCG ACGGCGGCAA ACAGCTGATG TTCCTCGTCA TCTCGGTGGT CATCTTCGCC
GGGGTGCTGT GGCTGATCCG CGACCACCGC AACCTGGCCC GGTACCCGTT CATCCTGGGC
CTCATGGGTC TGGTCGCCCT GGCCTCGCCG ATCACCCCGG TCATCGGCAC CGAGATCAAC
AACTCCCGGC TGTGGCTCAA CCTCGGTTTC ACCGTCATCC AGCCCGCCGA GTTCGCCAAA
CTGCTGCTGC TCATCTTCTT CGCCTATTAC CTGGTGCGCA AGCGCGAGGT GCTGTCGCTG
GCCAGCAAGA AGTTCCTGGG GCTGCCGTTC CCGCGGCTGA AGGACATGGT GCCGATCCTG
GTCGTGTGGC TCGCCGCGCT GCTGGTGATG GTCGGGCTCA AGGACCTCGG CACCTCGCTG
CTGCTGTTCG GGCTGTTCGT CGCGTTGCTG TACATCGCCA CCGAACGGAC CAGCTGGGTC
CTCATCGGTC TGTTGATGTT CGCCGGTGCC GTCGCGCTGG CCTACCCGAT GCTGTCCACC
TTCCAGGCTC GTGTCGACAT CTGGCTGGAC CCGTTCAAGG ACGCCAACGG CACCGGACGA
CAGCTGGTGC AGTCGCTCAT CGGCCTGGGC TCCGGCGGCA TGTTCGGCAG CGGACCCGGT
GCCGGGCAAC CGCAGGAGAC GAACCCGGCC GCCGACAGCG ACTTCATCTT CGCCGGACTC
GGCGAGGAAC TGGGCCTGTT CGGTCTGGTC TCGATCCTGA TGCTGTACCT GGTTCTGGTC
ACCCGGGGCA TGCGCGCCGG TCTCGGCGTC CGCGACTCCT TCGGGAAGCT GTTCGTCGGC
GGACTGTCGT TCGCGCTCGG CTACCAGGTG TTCGTGGTCC TCGGCGGTGT CACCAAGCTG
ATCCCGCTGA CCGGTCAGAC CGCCCCGTAC CTGGCTTCGG GTGGTTCCTC GCTCATCGCC
AACTGGATCC TGCTGGCGCT GCTGGTCCGG GTCTCCGACG CCGCGCGCCG CCCGCGAAGC
GCCCCGGTCG GCCCGATCAA GATCGCGCCG CCGCCCCCGC CGCCCGAGCC CGTCGACAAT
TCGCCGACCC AGATCGTCAC GATGCAGCAG CGGCCCTCGG AGGAAGAGGT GTCGCCGAGC
ACGCTCGACG ATTTCGGCGC CGACGAGACC CAGCCGCATC CGTCGCCACC GTCGGCGTCC
CCTCCGACCT CCCCTGAGGT GAAGCCGTGA
 
Protein sequence
MSTASPARVP TRRNTELALL LVAVLVLFVF EIAVEMKLTG GIQTTAYTLV GTIAAMFVVA 
HLLVRVFAPY ADPVILPAGG LLTGIGIIFI RRLDLSSFKF VDGIKKFTYE DDAERAAVGI
FSGDGGKQLM FLVISVVIFA GVLWLIRDHR NLARYPFILG LMGLVALASP ITPVIGTEIN
NSRLWLNLGF TVIQPAEFAK LLLLIFFAYY LVRKREVLSL ASKKFLGLPF PRLKDMVPIL
VVWLAALLVM VGLKDLGTSL LLFGLFVALL YIATERTSWV LIGLLMFAGA VALAYPMLST
FQARVDIWLD PFKDANGTGR QLVQSLIGLG SGGMFGSGPG AGQPQETNPA ADSDFIFAGL
GEELGLFGLV SILMLYLVLV TRGMRAGLGV RDSFGKLFVG GLSFALGYQV FVVLGGVTKL
IPLTGQTAPY LASGGSSLIA NWILLALLVR VSDAARRPRS APVGPIKIAP PPPPPEPVDN
SPTQIVTMQQ RPSEEEVSPS TLDDFGADET QPHPSPPSAS PPTSPEVKP