| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4648 |
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| Symbol | |
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| ID | 8885853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 4954745 |
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| End bp | 4956091 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003513384 |
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| Protein GI | 291302106 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000260895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATTGCCC CCCGAAAACA ACGACGTTTG ACCGCGATCG CGGCTTCGAC ACTGACGCTT
GCCCTGGCCG TGTCGGCTTG TGGCGCGCCC GAAGAGGACA GCAACCTTTC CGACAAGGAA
AAGGACTGTG CCAGCTACGA GAAATACGGC GACTTCAAGG ACAAGGACGC CGAGGTCTCG
ATCTACACGC CGATCACCGA CGCCGAGGGC GACGCCTACG AGAAGTCGTG GGCGTACTTC
GCCGAGTGCA CCGGCATCGA CGTCAAGTAC ACCGGCAGCA ACGACTTCGA GGCCCAGATC
GAGGTCAAGG TGAAGGGCGG CAAGGCCCCC GACATCGCGT TCTTCCCGCA GCCGGGTCTG
ATGGCCCGCT ACAAGGACAA GATGGTCCCG GCCTCCAAGA AGCTCGTGAA GGAAGCCGAG
AAGGGCTGGA GCGAGGACTG GCTGCAGTAC GGCACCTTCG ACGACGAGCT GTACGCCCAG
CCGATGAGCG CCAGCCTCAA GTCGCTGGTG TGGTACTCCC CCAAGTACTT CAAGGACAAC
GACCTCGAGG TCCCCGAGAC CTGGGACGAC CTGCTGGCGG TGTCCGACAA GATCGCCAAG
ACCGACGTCA AGCCGTGGTG TGCCGGTATC GAGTCCGGTG AGGCCACCGG CTGGCCGGTC
ACCGACTGGG TCGAGGACGC GCTGCTGCGC GAGTCCGGCG GCGAGCTGTA CGACAAGTGG
GTCAACCACG AGATCGCCTT CAACGACAAG CGGATCGTCA AGGCCCTGGA CAAGGTCGGC
GGCATCCTGA AGAACAAGGA CTACGTCAAC GGCGGCTACG GTGACGTCGA CTCGATGGCC
AAGGTGTCCT TCGAGGAGGG CGGCCAGCCC ATCGTCAAGG GCGAGTGCGC CATGCACCGT
CAGGCGTCGT TCTACGCGGC CCAGTGGCCC GAGGGCACCA AGGTCGGTCC CGACGGCGAC
GTGTTCGCGT TCTTCCTGCC GGGCAACAAG GCCGAGGAGA AGCCGCTGCT GGGTGCCGGT
GAGTTCGTCG CCGCCTTCCG CGACGACCCC GAGGTGCACG CGGTGCGCGA GTTCCTGGCC
TCCGAGCTGT ACGTCAACGC TCGCCTGAAG ACCGGCCCGC TGGCCTTCTC GCACAAGGGT
GCCGACCCGA AGAACGCCGA CAACGAGCTC AACAAGATGG TCATCGAGCT CTACCAGGAC
GAGGGAGCGG AGTTCCGTTT CGACGGTTCC GACCAGATGC CCGGTCACGT CGGCTCGAAG
TCCTTCTTCG TCGAGATGAC GAAGTGGATC AAGGGCAAGT CGTCGAAGGA CGCGCTCGAC
GCGATCGAGA AGTCCTGGGA CGAATGA
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| Protein sequence | MIAPRKQRRL TAIAASTLTL ALAVSACGAP EEDSNLSDKE KDCASYEKYG DFKDKDAEVS
IYTPITDAEG DAYEKSWAYF AECTGIDVKY TGSNDFEAQI EVKVKGGKAP DIAFFPQPGL
MARYKDKMVP ASKKLVKEAE KGWSEDWLQY GTFDDELYAQ PMSASLKSLV WYSPKYFKDN
DLEVPETWDD LLAVSDKIAK TDVKPWCAGI ESGEATGWPV TDWVEDALLR ESGGELYDKW
VNHEIAFNDK RIVKALDKVG GILKNKDYVN GGYGDVDSMA KVSFEEGGQP IVKGECAMHR
QASFYAAQWP EGTKVGPDGD VFAFFLPGNK AEEKPLLGAG EFVAAFRDDP EVHAVREFLA
SELYVNARLK TGPLAFSHKG ADPKNADNEL NKMVIELYQD EGAEFRFDGS DQMPGHVGSK
SFFVEMTKWI KGKSSKDALD AIEKSWDE
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