Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1857 |
Symbol | |
ID | 8883048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 1947023 |
End bp | 1949890 |
Gene Length | 2868 bp |
Protein Length | 955 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | preprotein translocase SecA subunit |
Protein accession | YP_003510646 |
Protein GI | 291299368 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.137741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAATGT TCGAGAAGCT GCTTCGTGCC GGAGAAGGTC GCGAGCTCAA AAGGTTGAAG GCCATCACCA AGGAAGTCAA TCGCCTTGAT GACGAGTACT CCGAGTACAC CGATGCCGAA CTGCGCGAGG AGACCGACGA GCTCAAGCAG CGATACGCGA ACGGGGAGAG CCTCGACGAA CTGCTGCCCT CGGCCTTCGC GACGGTGCGC GAGGCCGCCC ACCGGGTGCG CGGCATGCGG CACTTCGACG TCCAGATCAT GGGTGGGGCC GCCCTGCACC GCGGCAACAT CGCCGAGATG AAGACCGGTG AGGGCAAGAC CCTGGTGGCC ACGCTGCCGG CGTACCTCAA CGCGCTCACC GGCCAGGGCG TCCACATTGT CACGACCAAC GACTACCTGG CACAGCGCGA CGCCGAGTGG ATGGGGGAGA TCCACCGGTT CCTGGGCCTG TCGGTGGGCG TGGTGCTGTC CGGCCAGAAC TCGGCCAAGC ACCGCGAAGC CTACGAATGC GACATCACCT ACGGGACCAA CAACGAGTTC GGCTTCGACT ACCTGCGCGA CAACATGGCC CGGACCAGGG ACGGCCGGGT GCAGCGCGGA CACTTCTTCG CCATCGTCGA CGAGGTCGAC TCGATCCTCA TCGACGAGGC CCGGACCCCG CTGATCATCT CCGGCCCCGC CGCGCAGTCG CAGCGCTGGT ACGGGCAGTT CGCGAAGCTG GCCGCCCGGA TGCGCCGCGA CGACCACTAC GAAGTGGACG AAGCCAAGAA CACCATCTCG GTCACCGAGA AGGGCGTCGC GCTGGTCGAG GACCAGCTGG GAGTCGAGAA CCTCTACGAG CCGGAGAACA CCCCGCTCGT GGGTTACCTC AACAACTCCA TCAAGTCCAA GGAACTGTTC AAGAAGGACA AGGACTACAT CGTCTCCGAC GACGGCGAGG TCCTCATCGT CGACCAGTTC ACCGGCCGCG TCCTGCACGG TCGCCGCTAC AACGAGGGCA TGCACCAGGC CATCGAGGCC AAAGAGGGCG TGGCGATCAA GCAGGAGAAC CAGACGCTGG CGACCACGAC GCTGCAGAAC TACTTCCGGC AGTACGACAA GCTGGCCGGT ATGACCGGTA CCGCCCACAC CGAGGCGGGC GAGTTCCACA AGGTGTACGG CGTGGACGTC GTGGCCATCC CGACCCACCG CGAGATGGTC CGCAGCGACG AGAACGACGT CATCTACAAG ACCGAGGAAG CCAAGTTCCA GGCCGTCGTC GACGACATCG TGGAGCGTCA CGAGACCGGC CAGCCGGTGC TGGTGGGTAC CGTCAGCGTC GACAACAGCG AACTGCTGGC GCGGGAACTG AAGAAGCGCG GTGTGGAGCA CTCGGTGCTC AACGCGAAGT TCCACGCCAA GGAGGCCGAG ATCATCGCCC AGGCCGGGCG CAAGGGCGCG GTCACCGTGT CCACCAACAT GGCCGGCCGA GGCACCGACA TCCTGCTGGG CGGCAACCCC GAGTACCTGG CCACCGCCGA GCTGCGTCGT CGCGGCATCG ACGAGGCCGA CGAGGAGAAG TACGCCAAGG AGTGGGACAA GGCCCTCGAG AAGTGGGAAG CCGCCTGCGA GGAGGAGGGC GACGAGGTCC GCGACGCCGG TGGCCTCTAC GTCCTGGGCA CCGAACGCCA CGAGTCGCGC CGTATCGACA ACCAGCTGCG TGGTCGTGCC GGACGTCAGG GCGACCCGGG CGAGTCCCGG TTCTACCTGT CGCTGCGCGA CGACCTGATG CGCAAGTTCA ACGCGGCCGC CGTCGAGGCG CTCATGAACT CGCTGAAGAT GCCCGAGAAC ATGCCCATCG AACACAAGAT GGTCACCCGC ATGATCCGCA GCGCCCAGGC CCAGATCGAG GGCCAGAACG CCGAGGCGCG CAAGAACGTC CTGGAGTACG ACGAGGTCCT CAACAACCAG CGTGAGGTCA TCTACGGCGA GCGCCGCAAG GTGCTCGACG GCCAGGACGT CAGCCAGCAG ATCAAGCACA TGATGGACGA CGTCATCGTC GCCTACGTCA ACGGCGCCAC CGAGGACGGC TACACCGAGG ACTGGGACCT GGACGAACTG TGGAGCGGCT TCAAGCAGCT CTACCCGATC GGCATCACGG TCGCCGAACT CGAGGACTCG GTGGGCGGCC GCGAGAAGCT GGAGCCCGCG TCCATCGCTG AGGCCGTCCA GGACGACATC CACAAGGCCT ACGAGACCCG CGAGGAGGAA CTCGGCGGCC CGGAGATCAT GCGCAACCTG GAACGCGACG TCCTGCTCCA GGTCATCGAC ACCAAGTGGC GCGAGCACCT GTACGAGATG GACTACCTGA AGGAAGGTAT CCGGCTGCGG GCCTACGCGC AGCGCGACCC GGTCGTGGAG TACAAGCGCG AGGGTTTCGA CATGTTCAAC GTGATGCTCG ACGGCATCAA GGAGGACACC GTCCGGTACC TGTTCAGCCT TTCGGTGCAG GTCAAGGAAT CCGAGGAAGC CGAAGCCGCT CCGGAACCGG CGGCGCGACC GGGTAGGCGC AAGCCCAAGC CGCGTCCCAG CTCCTCGGCG ATGACCACCG TCACCGCCCG AGGCGGCCTG GCGGGAGCCG CCGAACCCGA GGAACAGCTG CAGTACAGCG CTCCGAGTGT CGACGGCGAC CCCAGCGACG ACGAGGCCCC GTCGGCGCTG CGCAAGGGCG GCCGCAAGGC GGGTCCCTCG TCGAAGGCGG CCAGCGGCGC CAAGCAGGCC AACCCGAACC AGCGCGTCGG CTCGACGCCC GGCCGCAACG AGGACTGCCC CTGCGGCTCC GGCAAGAAGT ACAAGCGCTG CCACGGCGCT CCCGGAGCCA AGAACTAG
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Protein sequence | MSMFEKLLRA GEGRELKRLK AITKEVNRLD DEYSEYTDAE LREETDELKQ RYANGESLDE LLPSAFATVR EAAHRVRGMR HFDVQIMGGA ALHRGNIAEM KTGEGKTLVA TLPAYLNALT GQGVHIVTTN DYLAQRDAEW MGEIHRFLGL SVGVVLSGQN SAKHREAYEC DITYGTNNEF GFDYLRDNMA RTRDGRVQRG HFFAIVDEVD SILIDEARTP LIISGPAAQS QRWYGQFAKL AARMRRDDHY EVDEAKNTIS VTEKGVALVE DQLGVENLYE PENTPLVGYL NNSIKSKELF KKDKDYIVSD DGEVLIVDQF TGRVLHGRRY NEGMHQAIEA KEGVAIKQEN QTLATTTLQN YFRQYDKLAG MTGTAHTEAG EFHKVYGVDV VAIPTHREMV RSDENDVIYK TEEAKFQAVV DDIVERHETG QPVLVGTVSV DNSELLAREL KKRGVEHSVL NAKFHAKEAE IIAQAGRKGA VTVSTNMAGR GTDILLGGNP EYLATAELRR RGIDEADEEK YAKEWDKALE KWEAACEEEG DEVRDAGGLY VLGTERHESR RIDNQLRGRA GRQGDPGESR FYLSLRDDLM RKFNAAAVEA LMNSLKMPEN MPIEHKMVTR MIRSAQAQIE GQNAEARKNV LEYDEVLNNQ REVIYGERRK VLDGQDVSQQ IKHMMDDVIV AYVNGATEDG YTEDWDLDEL WSGFKQLYPI GITVAELEDS VGGREKLEPA SIAEAVQDDI HKAYETREEE LGGPEIMRNL ERDVLLQVID TKWREHLYEM DYLKEGIRLR AYAQRDPVVE YKREGFDMFN VMLDGIKEDT VRYLFSLSVQ VKESEEAEAA PEPAARPGRR KPKPRPSSSA MTTVTARGGL AGAAEPEEQL QYSAPSVDGD PSDDEAPSAL RKGGRKAGPS SKAASGAKQA NPNQRVGSTP GRNEDCPCGS GKKYKRCHGA PGAKN
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