Gene Snas_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1857 
Symbol 
ID8883048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1947023 
End bp1949890 
Gene Length2868 bp 
Protein Length955 aa 
Translation table11 
GC content66% 
IMG OID 
Productpreprotein translocase SecA subunit 
Protein accessionYP_003510646 
Protein GI291299368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.137741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAATGT TCGAGAAGCT GCTTCGTGCC GGAGAAGGTC GCGAGCTCAA AAGGTTGAAG 
GCCATCACCA AGGAAGTCAA TCGCCTTGAT GACGAGTACT CCGAGTACAC CGATGCCGAA
CTGCGCGAGG AGACCGACGA GCTCAAGCAG CGATACGCGA ACGGGGAGAG CCTCGACGAA
CTGCTGCCCT CGGCCTTCGC GACGGTGCGC GAGGCCGCCC ACCGGGTGCG CGGCATGCGG
CACTTCGACG TCCAGATCAT GGGTGGGGCC GCCCTGCACC GCGGCAACAT CGCCGAGATG
AAGACCGGTG AGGGCAAGAC CCTGGTGGCC ACGCTGCCGG CGTACCTCAA CGCGCTCACC
GGCCAGGGCG TCCACATTGT CACGACCAAC GACTACCTGG CACAGCGCGA CGCCGAGTGG
ATGGGGGAGA TCCACCGGTT CCTGGGCCTG TCGGTGGGCG TGGTGCTGTC CGGCCAGAAC
TCGGCCAAGC ACCGCGAAGC CTACGAATGC GACATCACCT ACGGGACCAA CAACGAGTTC
GGCTTCGACT ACCTGCGCGA CAACATGGCC CGGACCAGGG ACGGCCGGGT GCAGCGCGGA
CACTTCTTCG CCATCGTCGA CGAGGTCGAC TCGATCCTCA TCGACGAGGC CCGGACCCCG
CTGATCATCT CCGGCCCCGC CGCGCAGTCG CAGCGCTGGT ACGGGCAGTT CGCGAAGCTG
GCCGCCCGGA TGCGCCGCGA CGACCACTAC GAAGTGGACG AAGCCAAGAA CACCATCTCG
GTCACCGAGA AGGGCGTCGC GCTGGTCGAG GACCAGCTGG GAGTCGAGAA CCTCTACGAG
CCGGAGAACA CCCCGCTCGT GGGTTACCTC AACAACTCCA TCAAGTCCAA GGAACTGTTC
AAGAAGGACA AGGACTACAT CGTCTCCGAC GACGGCGAGG TCCTCATCGT CGACCAGTTC
ACCGGCCGCG TCCTGCACGG TCGCCGCTAC AACGAGGGCA TGCACCAGGC CATCGAGGCC
AAAGAGGGCG TGGCGATCAA GCAGGAGAAC CAGACGCTGG CGACCACGAC GCTGCAGAAC
TACTTCCGGC AGTACGACAA GCTGGCCGGT ATGACCGGTA CCGCCCACAC CGAGGCGGGC
GAGTTCCACA AGGTGTACGG CGTGGACGTC GTGGCCATCC CGACCCACCG CGAGATGGTC
CGCAGCGACG AGAACGACGT CATCTACAAG ACCGAGGAAG CCAAGTTCCA GGCCGTCGTC
GACGACATCG TGGAGCGTCA CGAGACCGGC CAGCCGGTGC TGGTGGGTAC CGTCAGCGTC
GACAACAGCG AACTGCTGGC GCGGGAACTG AAGAAGCGCG GTGTGGAGCA CTCGGTGCTC
AACGCGAAGT TCCACGCCAA GGAGGCCGAG ATCATCGCCC AGGCCGGGCG CAAGGGCGCG
GTCACCGTGT CCACCAACAT GGCCGGCCGA GGCACCGACA TCCTGCTGGG CGGCAACCCC
GAGTACCTGG CCACCGCCGA GCTGCGTCGT CGCGGCATCG ACGAGGCCGA CGAGGAGAAG
TACGCCAAGG AGTGGGACAA GGCCCTCGAG AAGTGGGAAG CCGCCTGCGA GGAGGAGGGC
GACGAGGTCC GCGACGCCGG TGGCCTCTAC GTCCTGGGCA CCGAACGCCA CGAGTCGCGC
CGTATCGACA ACCAGCTGCG TGGTCGTGCC GGACGTCAGG GCGACCCGGG CGAGTCCCGG
TTCTACCTGT CGCTGCGCGA CGACCTGATG CGCAAGTTCA ACGCGGCCGC CGTCGAGGCG
CTCATGAACT CGCTGAAGAT GCCCGAGAAC ATGCCCATCG AACACAAGAT GGTCACCCGC
ATGATCCGCA GCGCCCAGGC CCAGATCGAG GGCCAGAACG CCGAGGCGCG CAAGAACGTC
CTGGAGTACG ACGAGGTCCT CAACAACCAG CGTGAGGTCA TCTACGGCGA GCGCCGCAAG
GTGCTCGACG GCCAGGACGT CAGCCAGCAG ATCAAGCACA TGATGGACGA CGTCATCGTC
GCCTACGTCA ACGGCGCCAC CGAGGACGGC TACACCGAGG ACTGGGACCT GGACGAACTG
TGGAGCGGCT TCAAGCAGCT CTACCCGATC GGCATCACGG TCGCCGAACT CGAGGACTCG
GTGGGCGGCC GCGAGAAGCT GGAGCCCGCG TCCATCGCTG AGGCCGTCCA GGACGACATC
CACAAGGCCT ACGAGACCCG CGAGGAGGAA CTCGGCGGCC CGGAGATCAT GCGCAACCTG
GAACGCGACG TCCTGCTCCA GGTCATCGAC ACCAAGTGGC GCGAGCACCT GTACGAGATG
GACTACCTGA AGGAAGGTAT CCGGCTGCGG GCCTACGCGC AGCGCGACCC GGTCGTGGAG
TACAAGCGCG AGGGTTTCGA CATGTTCAAC GTGATGCTCG ACGGCATCAA GGAGGACACC
GTCCGGTACC TGTTCAGCCT TTCGGTGCAG GTCAAGGAAT CCGAGGAAGC CGAAGCCGCT
CCGGAACCGG CGGCGCGACC GGGTAGGCGC AAGCCCAAGC CGCGTCCCAG CTCCTCGGCG
ATGACCACCG TCACCGCCCG AGGCGGCCTG GCGGGAGCCG CCGAACCCGA GGAACAGCTG
CAGTACAGCG CTCCGAGTGT CGACGGCGAC CCCAGCGACG ACGAGGCCCC GTCGGCGCTG
CGCAAGGGCG GCCGCAAGGC GGGTCCCTCG TCGAAGGCGG CCAGCGGCGC CAAGCAGGCC
AACCCGAACC AGCGCGTCGG CTCGACGCCC GGCCGCAACG AGGACTGCCC CTGCGGCTCC
GGCAAGAAGT ACAAGCGCTG CCACGGCGCT CCCGGAGCCA AGAACTAG
 
Protein sequence
MSMFEKLLRA GEGRELKRLK AITKEVNRLD DEYSEYTDAE LREETDELKQ RYANGESLDE 
LLPSAFATVR EAAHRVRGMR HFDVQIMGGA ALHRGNIAEM KTGEGKTLVA TLPAYLNALT
GQGVHIVTTN DYLAQRDAEW MGEIHRFLGL SVGVVLSGQN SAKHREAYEC DITYGTNNEF
GFDYLRDNMA RTRDGRVQRG HFFAIVDEVD SILIDEARTP LIISGPAAQS QRWYGQFAKL
AARMRRDDHY EVDEAKNTIS VTEKGVALVE DQLGVENLYE PENTPLVGYL NNSIKSKELF
KKDKDYIVSD DGEVLIVDQF TGRVLHGRRY NEGMHQAIEA KEGVAIKQEN QTLATTTLQN
YFRQYDKLAG MTGTAHTEAG EFHKVYGVDV VAIPTHREMV RSDENDVIYK TEEAKFQAVV
DDIVERHETG QPVLVGTVSV DNSELLAREL KKRGVEHSVL NAKFHAKEAE IIAQAGRKGA
VTVSTNMAGR GTDILLGGNP EYLATAELRR RGIDEADEEK YAKEWDKALE KWEAACEEEG
DEVRDAGGLY VLGTERHESR RIDNQLRGRA GRQGDPGESR FYLSLRDDLM RKFNAAAVEA
LMNSLKMPEN MPIEHKMVTR MIRSAQAQIE GQNAEARKNV LEYDEVLNNQ REVIYGERRK
VLDGQDVSQQ IKHMMDDVIV AYVNGATEDG YTEDWDLDEL WSGFKQLYPI GITVAELEDS
VGGREKLEPA SIAEAVQDDI HKAYETREEE LGGPEIMRNL ERDVLLQVID TKWREHLYEM
DYLKEGIRLR AYAQRDPVVE YKREGFDMFN VMLDGIKEDT VRYLFSLSVQ VKESEEAEAA
PEPAARPGRR KPKPRPSSSA MTTVTARGGL AGAAEPEEQL QYSAPSVDGD PSDDEAPSAL
RKGGRKAGPS SKAASGAKQA NPNQRVGSTP GRNEDCPCGS GKKYKRCHGA PGAKN