Gene Smed_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3482 
Symbol 
ID5324370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3689739 
End bp3690557 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content63% 
IMG OID640792434 
Producthypothetical protein 
Protein accessionYP_001329135 
Protein GI150398668 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00930264 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCA CGCCGGCTGA AACCCAGATC ACGCGGATAG AAGTGGGAAG GGGCGACCGG 
GCGAGAAACA TCGCCATGCG TATCTTCCGC ACCGAGAATC CACCGGCGCA GCCTTCCGGC
CTTCCGGCGC TCGTCTGGCT CGGCGGCTAC CGATCCGACA TGACCGGAAC GAAGGCGGTC
GAGGTCGAGC GCCACGCACG CGACCTCGGT ACTGACTGCA TTCGTTTCGA CTATTCCGGT
CACGGCTCGT CCACCGGCGA TTACAGGGAC GGCACGATCT CGCAATGGCT CGAGGAGAGC
CTTGCCGTTA TCGACCACGC GGCCTTGACG CGCATGATCC TGATCGGTTC GTCCATGGGA
GCCTGGGTCG CGCTACGCCT GCTACAGGAG CTCAGAGCCC GCGGTCAGGC GGACCGCGTC
AGCGGTCTTG TGCTGATAGC GCCCGCCCCT GACTTCACGG CCGAGCTCAT CGAGCCCAAC
CTCACCGATG CTGAAAAGTC TTCGCTCTCC GAACGGGGGT ATTTCGAGGA GCCCTCGGAA
TACAGCCCCG AACCCAACAT CTTTACCCGC GCGCTGATCG AGGACGGCCG CAACAACCTG
GTCATGAAAG GGCCGATCGA AACGGGCTGC CCGGTTCATA TCCTCCAGGG CATGCGCGAT
CCGGACGTCC CCTATACGCA CGCCCTCAAG CTGATGGAGC ACATGCCGGC CGACGACGTC
GTCATGACAC TGATCCGGGA CGGCGACCAT CGGTTGTCCC GCGAAGAGGA TATTGCCAAA
TTGAAACAGG CAATCGACGC GATGCTGACC AAGGCCTGA
 
Protein sequence
MSTTPAETQI TRIEVGRGDR ARNIAMRIFR TENPPAQPSG LPALVWLGGY RSDMTGTKAV 
EVERHARDLG TDCIRFDYSG HGSSTGDYRD GTISQWLEES LAVIDHAALT RMILIGSSMG
AWVALRLLQE LRARGQADRV SGLVLIAPAP DFTAELIEPN LTDAEKSSLS ERGYFEEPSE
YSPEPNIFTR ALIEDGRNNL VMKGPIETGC PVHILQGMRD PDVPYTHALK LMEHMPADDV
VMTLIRDGDH RLSREEDIAK LKQAIDAMLT KA