Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3482 |
Symbol | |
ID | 5324370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3689739 |
End bp | 3690557 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640792434 |
Product | hypothetical protein |
Protein accession | YP_001329135 |
Protein GI | 150398668 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00930264 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACCA CGCCGGCTGA AACCCAGATC ACGCGGATAG AAGTGGGAAG GGGCGACCGG GCGAGAAACA TCGCCATGCG TATCTTCCGC ACCGAGAATC CACCGGCGCA GCCTTCCGGC CTTCCGGCGC TCGTCTGGCT CGGCGGCTAC CGATCCGACA TGACCGGAAC GAAGGCGGTC GAGGTCGAGC GCCACGCACG CGACCTCGGT ACTGACTGCA TTCGTTTCGA CTATTCCGGT CACGGCTCGT CCACCGGCGA TTACAGGGAC GGCACGATCT CGCAATGGCT CGAGGAGAGC CTTGCCGTTA TCGACCACGC GGCCTTGACG CGCATGATCC TGATCGGTTC GTCCATGGGA GCCTGGGTCG CGCTACGCCT GCTACAGGAG CTCAGAGCCC GCGGTCAGGC GGACCGCGTC AGCGGTCTTG TGCTGATAGC GCCCGCCCCT GACTTCACGG CCGAGCTCAT CGAGCCCAAC CTCACCGATG CTGAAAAGTC TTCGCTCTCC GAACGGGGGT ATTTCGAGGA GCCCTCGGAA TACAGCCCCG AACCCAACAT CTTTACCCGC GCGCTGATCG AGGACGGCCG CAACAACCTG GTCATGAAAG GGCCGATCGA AACGGGCTGC CCGGTTCATA TCCTCCAGGG CATGCGCGAT CCGGACGTCC CCTATACGCA CGCCCTCAAG CTGATGGAGC ACATGCCGGC CGACGACGTC GTCATGACAC TGATCCGGGA CGGCGACCAT CGGTTGTCCC GCGAAGAGGA TATTGCCAAA TTGAAACAGG CAATCGACGC GATGCTGACC AAGGCCTGA
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Protein sequence | MSTTPAETQI TRIEVGRGDR ARNIAMRIFR TENPPAQPSG LPALVWLGGY RSDMTGTKAV EVERHARDLG TDCIRFDYSG HGSSTGDYRD GTISQWLEES LAVIDHAALT RMILIGSSMG AWVALRLLQE LRARGQADRV SGLVLIAPAP DFTAELIEPN LTDAEKSSLS ERGYFEEPSE YSPEPNIFTR ALIEDGRNNL VMKGPIETGC PVHILQGMRD PDVPYTHALK LMEHMPADDV VMTLIRDGDH RLSREEDIAK LKQAIDAMLT KA
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