Gene Smal_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3645 
Symbol 
ID6474525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4106236 
End bp4106976 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID642732844 
ProductDopa 45-dioxygenase 
Protein accessionYP_002030027 
Protein GI194367417 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3805] Aromatic ring-cleaving dioxygenase 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.177178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCCGG ACCCACAGAC TTCCGCTACC GACGCCTTGT TCGATGCCGA CGACGACGCC 
CAGTGGGCCG ACCTGCTCTC GCCCACGCGC CGGCGGCTGA TCGCCTCGGC CGGGCTGGCC
GCCGGTGGCC TGGCCAGCGC TACCGCTGCC GCCGCGCCGC CGCGCGCCGA GGCCGCTGTG
AACACGACCG AGCCGGGCCG CCCCGGTTTC CGCGCCCTTG TTCCGCCCGC GCCCCAGGGC
CGCAGCCCCT GGGGCGAGGC CACGGCCAGC GAGCCGACGC CGCGTCCGGC CAGCGTGCGC
CCCGGCGAGG CCACCCTGCC GGCCACCCCG CGTGCCTACA CCGACATCAA GAGCTATCAC
GCGCATATCT ACTTCGATGA AGACAGTTTC GAGAAAGCCG CACTGCTGCG ACGCTGGGCC
GCCGAACGCT TCCCGGTGGA GCTGGGCAAC TGGAACCTGG AGCCGCGCGG CCCGCACGTC
ACGCCCTCGT TCTACTTCGG CTTCACCAAC GACCTGCTGC CGGTACTGGT GCCGTGGCTG
CAGCTCAACA GCCTGGGCCT GACGATCCTG ATCCATCCCA ATACTGGCGA TGGCCGCGCT
GACCACCTCC ATTACGCGTT GTGGGTGAAC CGCGCACAGC CGGTGAACGC CTACAACTGG
CCGGCGCCGA AGCCGGGCGA GCAGGAGCCG CTGGAAGAAG TGTTTCCGAA CGTGGTGCCG
ACGGTGCCGC TGGAGACGTG A
 
Protein sequence
MHPDPQTSAT DALFDADDDA QWADLLSPTR RRLIASAGLA AGGLASATAA AAPPRAEAAV 
NTTEPGRPGF RALVPPAPQG RSPWGEATAS EPTPRPASVR PGEATLPATP RAYTDIKSYH
AHIYFDEDSF EKAALLRRWA AERFPVELGN WNLEPRGPHV TPSFYFGFTN DLLPVLVPWL
QLNSLGLTIL IHPNTGDGRA DHLHYALWVN RAQPVNAYNW PAPKPGEQEP LEEVFPNVVP
TVPLET