| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1225 |
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| Symbol | |
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| ID | 6475077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 1391122 |
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| End bp | 1393062 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642730390 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002027613 |
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| Protein GI | 194365003 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.115574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAG AATCCCAAGC GCAGCTGCAG TTCGCGCAGC TCGGCCTGTC CGAGTCTGTC
ATGCAGGCGG TCACCGCCAT CGGCTACGAA ACCCCGTCGC CGATCCAGGC TGCCACCATT
CCGGCGATGC TGGAAGGCCG TGACGTGCTG GGCCAGGCCC AGACCGGTAC CGGCAAGACC
GCCGCCTTTG CGCTGCCGGT ACTGTCCAAC ATCGACCTGC AGCAGATCAA GCCGCAGGCG
CTGGTGCTGG CCCCGACCCG CGAGCTGGCC ATCCAGGTCG CCGAGGCGTT CCAGTCCTAT
TCCTCGAAGA TCCCCGGCTT CCGCGTGCTG CCGGTGTACG GCGGCCAGCC GTACGGCCAG
CAGCTGTCGG CGCTGCGTCG CGGCGTGCAC ATCGTGGTCG GTACCCCCGG CCGCGTCATC
GACCACCTGG ATCGCAGCAC GCTGGACCTG TCCGAGCTGA AGACGCTGGT GCTGGACGAA
GCCGACGAAA TGCTGCGCAT GGGCTTCATC GACGACGTCG AAGCCGTGCT GAAGAAGCTG
CCGGCCAAGC GCCAGGTCGC CCTGTTCTCG GCCACGATGC CGCCGCAGAT CCGCCGCATC
GCGCAGACCT ACCTGCAGGA CCCGGTGGAA GTGACCATCG CGGCCAAGAC CACCACCTCG
GCCAACATCC GCCAGCGCTA CTGGTGGGTG AGCGGCATGC ACAAGCTGGA CGCGCTGACC
CGCATCCTGG AAGTCGAGCC GTTCGACGCG ATGATCATTT TCGCGCGCAC CAAGGCCGGT
ACCGAGGAAC TGGCCAGCAA GCTGCAGGCC CGTGGCCTGG CCGCTGCCGC CATCAACGGT
GACATGCAGC AGGCGCAGCG TGAGCGCACC ATCGCCATGC TGAAGGAAGG CAAGCTGGAT
ATCCTGGTCG CCACCGACGT GGCTGCCCGC GGCCTGGACG TGGAACGCAT CAGCCACGTG
CTGAACTACG ACATCCCGTA CGACACCGAA AGCTACGTGC ACCGCATCGG CCGTACTGGC
CGTGCCGGCC GCAGCGGCGA GGCGATCCTG TTCGCCACCC CGCGCGAGAA GGGCATGCTG
CGCCAGATCG AGCGTGCTAC CCGCCAGCCG ATCGAAGAAA TGCAGCTGCC GAGCGTGGAA
GCGGTCAACG ACAACCGCAT CAACAAGTTC ACCTCGCGCA TCACCGAGAC CCTCGGCCAG
GGCGGCCTGG ACTTCTACCG CCAGCTGTTG GAACGCTTCG AGACCGAGCA GAACGTGCCG
GCCATCGAAG TGGCTGCTGC GCTGGCGAAG ATGATGCAGG GCGATACCCC GTTCCTGCTG
CAGCCGCCGG TGCGTGCACC GCGCGAAGAA CGTGCGCCGC GTGAGCGTTT CGAGCGCACT
GAGCGCCCGG AACGTGGCGA TCGCAACGAG CGTGGTCCGC GCTTCGAGCG TGGCCCGCGT
CGTGACGATG CCGAGGGTGG CTTCGAGCAG CGCCCGCGCC GTGATGTGCC GCCGCGCGGT
GCACCGGAGC AGGGCATGGA GACCTACCGC ATTTCGGTCG GCCACCAGCA CGGCGTGAAG
CCGGCCAACA TCGTCGGCGC CATCGCCAAC GAGGCCGGCC TGGAAAGCCG TTTCATCGGC
CGCATCGACA TTCACGATGA CTTCTCGCTG CTGGACCTGC CGGCGCAGAT GCCGTCGGAC
GTGCTGACCC ACCTGCAGAA GGTGTGGGTC TCCGGCCAGC AGCTGCAGAT GCGTCCGCTG
GCGGCTGGTG AAGAGATCAA CCCGGCGCCG CGTCCGTTCA AGCCGCGCTT CGACAAGCGT
GGTCCGGGTG GTCCGGGTGG CCCGCGCCGC AGTGGCCCGG GTGGCCCTGG TGGCGACCGC
GGTGGTGACC GCGGTGGTGA CCGCGACAGC CGCCCGCCGC GTCGTGACGG CTTCAAGCCG
CGCGGCCCGC GCAGCTACTA A
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| Protein sequence | MSQESQAQLQ FAQLGLSESV MQAVTAIGYE TPSPIQAATI PAMLEGRDVL GQAQTGTGKT
AAFALPVLSN IDLQQIKPQA LVLAPTRELA IQVAEAFQSY SSKIPGFRVL PVYGGQPYGQ
QLSALRRGVH IVVGTPGRVI DHLDRSTLDL SELKTLVLDE ADEMLRMGFI DDVEAVLKKL
PAKRQVALFS ATMPPQIRRI AQTYLQDPVE VTIAAKTTTS ANIRQRYWWV SGMHKLDALT
RILEVEPFDA MIIFARTKAG TEELASKLQA RGLAAAAING DMQQAQRERT IAMLKEGKLD
ILVATDVAAR GLDVERISHV LNYDIPYDTE SYVHRIGRTG RAGRSGEAIL FATPREKGML
RQIERATRQP IEEMQLPSVE AVNDNRINKF TSRITETLGQ GGLDFYRQLL ERFETEQNVP
AIEVAAALAK MMQGDTPFLL QPPVRAPREE RAPRERFERT ERPERGDRNE RGPRFERGPR
RDDAEGGFEQ RPRRDVPPRG APEQGMETYR ISVGHQHGVK PANIVGAIAN EAGLESRFIG
RIDIHDDFSL LDLPAQMPSD VLTHLQKVWV SGQQLQMRPL AAGEEINPAP RPFKPRFDKR
GPGGPGGPRR SGPGGPGGDR GGDRGGDRDS RPPRRDGFKP RGPRSY
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