Gene Smal_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0729 
Symbol 
ID6477828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp846580 
End bp847671 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content65% 
IMG OID642729875 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_002027117 
Protein GI194364507 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.195825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATCA AATGCGGCAT CGTCGGCCTG CCCAACGTCG GCAAGTCGAC CCTGTTCAAC 
GCGCTGACCA AGGCGGGCAT CGCCGCGGCC AACTTCCCGT TCTGCACCAT CGAGCCGAAC
GTCGGCATCG TGCCGGTGCC GGATCCGCGC CTGAACGAGC TGGCAGCGAT CATCAACCCG
CAGAAGGTCA TCCCGACTGC GGTCGAGTTC GTCGACATCG CCGGCCTGGT CGCCGGTGCC
GCTAGCGGTG AAGGCTTGGG CAACAAGTTC CTGGCGCACA TCCGCGAAGT CGATGCGATC
ACCCACGTGG TGCGCTGCTT CGAGAACGCC GACGTCATCC ACGTCAACAA CAAGGTCGAC
CCGATCTCGG ATATCGAAAC CATCGATACC GAACTGGCGC TGGCCGACCT GGACAGCGTC
GAGAAGGCAC TGAACCGTGC CGAGCGCGCC GCCAAGGGGG GTGACAAGGA CGCGGCGGCG
CGCAAGCCGG TGCTGGCCAA GCTGCAGGCG GCGCTGTCCG ACGGCAAGTC CGGTCGTTCG
GTCGGCCTGG ACGAGGAAGA GAAGGCGCTG GTGCGCGATC TGTTCCTGCT GACCCTGAAG
CCGGTGATGT ACATCGCCAA CGTGCTGGAA GACGGTTTCG AGAACAACCC GCACCTGGAT
GCCGTGCGCG CGCATGCCGC CGCTGAAGGC GCGCAGGTGG TGCCGGTGTC GGCCGCGATC
GAAGAAGAGC TGTCCCAGCT CGACGACGAA GACCGCGATA CCTTCCTGGC CGACCTGGGC
CTGAGCGAGC CGGGCCTGAA CCGCGTGATC AACGCGGCCT ACAGCCTGCT CGGCCTGCAG
ACCTACTTCA CCGCTGGCGT GAAGGAAGTG CGTGCTTGGA CCGTGCGCAA GGGCGCCACC
GCCCCGCAGG CTGCCGCTGT CATCCACACC GACTTCGAGA AGGGCTTCAT CCGCGCTGAA
ACCATCGCGT ATGACGACTT CATCAAGTAC AAGGGCGAAG CCGGCGCCAA GGAAGCCGGT
CGCCTGCGCC TGGAAGGCAA GGAATACCGC GTGCAGGAAG GCGACATCCT GCACTTCCGC
TTCAACGTCT GA
 
Protein sequence
MGIKCGIVGL PNVGKSTLFN ALTKAGIAAA NFPFCTIEPN VGIVPVPDPR LNELAAIINP 
QKVIPTAVEF VDIAGLVAGA ASGEGLGNKF LAHIREVDAI THVVRCFENA DVIHVNNKVD
PISDIETIDT ELALADLDSV EKALNRAERA AKGGDKDAAA RKPVLAKLQA ALSDGKSGRS
VGLDEEEKAL VRDLFLLTLK PVMYIANVLE DGFENNPHLD AVRAHAAAEG AQVVPVSAAI
EEELSQLDDE DRDTFLADLG LSEPGLNRVI NAAYSLLGLQ TYFTAGVKEV RAWTVRKGAT
APQAAAVIHT DFEKGFIRAE TIAYDDFIKY KGEAGAKEAG RLRLEGKEYR VQEGDILHFR
FNV