Gene Smal_0654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0654 
Symbol 
ID6477682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp774680 
End bp775381 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID642729799 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_002027042 
Protein GI194364432 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.428767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.946493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTC GCCGTACCTG CCTGCTGATG CTGGGCCTGC TGACCGCCGC ACCGCTGGCT 
CAGGCGCTGA GCCCGGCCAA GCCGCCGCGC GTGCCCGAGC AGGTCTCCAA CGTGGCCTGG
GCCGGCGACA TGGCCCACTT CGCCAGCACC GACCAGACCA GCCCACCGCC ACGGGGCGGC
ATCGAGTTCA TCGGCAGCTC CTCGATCCGC ATGTGGGAAG GCCTGGCAGC CGACTTCCCC
GGCCAGCCGG TGTTCAACCG TGGTTTCGGC GGTTCGGAAG TGCGCGACAG CACCTGGTAT
GCCGGCCAGA TCGTGGTGCC GTATGCACCG TGCAAGGTGT TCTTCTACGC CGGTGACAAC
GACCTCAACA GCGGCCGCAG CGCCGTGCAG GTGCGCGACG ATGTGGTTGC CTTCGTGCAG
CGCGTGCATC GCGACCTGCC GAAGACGAAG GTGGAGTACC TGTCGATTAA GCCAAGCCCG
TCGCGCGCGC ACCTGCTGCC GGCGATCAAC GAGGCCAACA CGCTGATCAA GGCGGCCCTG
GCCAAGCTGC CCAACACCGG CTTCACCGAC GTCTACACGC CGATGCTCGG CACCGACGGC
CAGCCGGATG CGTCGCTGTT CCGCGAGGAC ATGCTGCACA TGACCCCGGC CGGCTATGCG
ATCTGGACCA GGGCACTGGC GCCGAAGGTC AACTGCAACT GA
 
Protein sequence
MSRRRTCLLM LGLLTAAPLA QALSPAKPPR VPEQVSNVAW AGDMAHFAST DQTSPPPRGG 
IEFIGSSSIR MWEGLAADFP GQPVFNRGFG GSEVRDSTWY AGQIVVPYAP CKVFFYAGDN
DLNSGRSAVQ VRDDVVAFVQ RVHRDLPKTK VEYLSIKPSP SRAHLLPAIN EANTLIKAAL
AKLPNTGFTD VYTPMLGTDG QPDASLFRED MLHMTPAGYA IWTRALAPKV NCN