Gene Slin_4364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4364 
Symbol 
ID8728124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5292118 
End bp5293002 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content52% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003389144 
Protein GI284039214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGTG TAGTTATACC TGTCCACAAC CGCCTTGAGT ACACCCGGCA ATGCCTGGCG 
TGCCTTTCGG CGCAAACCTA CCGCAATTTT CAGGTTATTG TCGTCGATGA TGGTTCCACC
GATGGTACCG ACATCATGAT CAGCCAGGAG TTCCCGGAGG TCGTTGTTCT GAAAGGCGAC
GGCAATTTAT GGTGGACAGA AGCCACCAAC TGGGGCATCC GCTACGCCCA GAAAACGCAG
GACAAACGCC AGGAAAACTT TATCCTGACG CTGAACGACG ATACCCGCGT AGCGCCCGAC
TACCTGCAAA CCATGCTGGA TGCTTATCGG AAGTACAAAC CCTGCCTTAT TGGGTCGGTG
AGTGTAGACA GCGACAACCC CGAAAAGCTC GAATATGCCG GGGCTTCCTT TGAATTGTAT
ACGGCGGGTG GTCGTCACCT GTGCGAAGAC TATAACAATA GCTACCGCGA ACTGGCCGCC
AGAACGGCCT ACGTTGAATC GCACTCGCTG CCCGGCCGGG GTACGCTGAT TCCGATGGAG
GTTTTCGATA AAATCGGCCT GTATGACTCC AAAAGATACA TTCATTACAT GTCGGACATC
GAGTTTTCAG TGCGGGCGCG GAAGGCGGGT TACCGGCTGA TCGTCAACGT GCCGAGTGTG
GTGTATGAGT ACGTAAAGGC AACGGGGATT CAGGTAGAGC GCAAAATAAC GCTGAAGGAA
TTCATCAACA GCTTCACCTC CATCAAGTCG CCGACCAACC TGCGGATACG CTACAACTTT
GCCATCGACC ACTCCAAGAC GAAAGCACTG TATTTCTTCT TCGACGTGGG CCGGATCTGC
ACGGGTTTTT TACTGCGTAA AGTAAGACTG ATGAAACCGC TATAA
 
Protein sequence
MISVVIPVHN RLEYTRQCLA CLSAQTYRNF QVIVVDDGST DGTDIMISQE FPEVVVLKGD 
GNLWWTEATN WGIRYAQKTQ DKRQENFILT LNDDTRVAPD YLQTMLDAYR KYKPCLIGSV
SVDSDNPEKL EYAGASFELY TAGGRHLCED YNNSYRELAA RTAYVESHSL PGRGTLIPME
VFDKIGLYDS KRYIHYMSDI EFSVRARKAG YRLIVNVPSV VYEYVKATGI QVERKITLKE
FINSFTSIKS PTNLRIRYNF AIDHSKTKAL YFFFDVGRIC TGFLLRKVRL MKPL