Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3201 |
Symbol | |
ID | 4256230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3791552 |
End bp | 3796669 |
Gene Length | 5118 bp |
Protein Length | 1705 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123885 |
Product | cell wall anchor domain-containing protein |
Protein accession | YP_739242 |
Protein GI | 114048692 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.151365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCTTA AAATACTAAC TTGTACTATT GCTGCCGCCC TTTATGGTGC TGGTGCTATG CAGGCTGCTG CTAGCATAGG CGATGTACAT AAACTTAAAG GTTTGCAGTT AACATCTGAT CAAATTGCAA AGTTAAATGC CCCTGAAACG AAGATCGATG ACGCTGATTT AGGGATAGGA CTCAACCTTC AAATTACCCC TCAAGCTAAC AAATTCGAAT TTGAGGATGG CATAACGGGT GAGCAGATCT ATATCGTTCG TCTGAATCAA AAACCACTGG CGCAAGTCAG TACGGAACTG TTAGCCAGCA CGACTGCCAG CAAAACCTTT GGCAAATCGT CAAACTCAAA ATTATTCGTT GCCGGTCAAC CTGCCAGCAG CGCGGTAAAA AACTATCGTA GCCGCTTACT CGACAGCCAA AGACAAGTGA TTGCTGACGT TCAGTCCACC GTGGGTGCCC GCCAAGTACG TCAACAATTT ACCAATGCGG TCAACGGCTT CTCTATCGCA ATGACGCAGG AAGAGGCGCA GCGCGTGTCT CAACTGGCCA ATGTGTCCTC GGTTCGTCGC TCTAAAACCT ATGAATTATT ATCGGATGCG GGCCCTGAGC TAATTCAAGC CAATAAGATT TGGTCTGGTG AGGCAACAGA TTCAGTACCT TACAAAGGTG AAGGGATTAT CGTTGGTATC GTCGATACTG GGATTAACTC GGATCACCGT TCATTCGCCG ATGTCGGTGA TGATGGTTAC GACCACACTA ACCCATGGAA TGCGGGTAAC TACGTAGGTG ACTGTACCAA GAGCGGTTTT GAGACCATGT GTAACGACAA GTTAATTGGC GTTCGCTCAT ACCCTGTTAT CACTGATAAT TTCACCAGCG GAGTGTATGG CGCAACTCGT CCAGCCGTGG GTGAAGATTA TCAAGGCCAC GGTACACACG TTGCTTCAAC CGCTGCGGGT AACGTCCTGT TAGATGTCGA TTATGTCAAC CCTGATTCGG GTACAGAGGC ATCAGATGGT TCCGTGATTA AGCCTAAACT ATTCCCTCGT ATGAGTGGTG TAGCGCCACA CGCGAACATC GTTGCTTACC AAGTGTGTCA CCCTTCTAAC GCAATCAATG CAGGCTGTCC TGGTGAAGCG TTAATTGCAG GTATTGAAGA TGCGATCAAC GATGGTGTTG ACGTGATCAA CTTCTCCATC GGCGGTCAGG ATTCAAACCC ATGGGCTGAC GATGTGGAAT TAGCTTTCTT ATCGGCTCGC GAAGCCGGTA TTTCCGTTGC GGTGGCTGCG GGTAACTCTG GTCAACCAGT GGGTTACAAA GAATATTTTG GCCGAATTGA CCACGCGTCA CCTTGGTTAA TGAACGTTGC TGCTAGTACC CATGCTCGCG AAGTTGAAAT CACCACTAAG CTGATTGACC CTATGGGCGG CAGTGAAGTG CCAAAATGGA GCGAAATTGT TGGTGGTGCA ATCAACACGG CACCAGTCAC AGGTATGGTG GTTAACGCTA AAAACTTTGG TGATGAATAC TGTGCTAAAC CCTTCCCAGC GGGTACCTTC GATCTGAAAG ATGGCGACGG TAATCCAACG GATGTGATCG TGGTATGTAA GCGTAATAGC CTAGAAGATC CCAATGCGGT AGCCCGTACT GCTAAGGCTG ATAACATCAA AGCTGGCGGC GCAGATGGCA TGATCATGTA CAACTATGCG ACCGCCGATG CGTTGGTGCC TACCGCTTCT TACTCTGTTC CAAGTATCCA TATTACTAAG GAAGAGTGGG ATGGTCGCTA TGATAATGGT TTGGCGGGTT ATGGTCTAAG TGATTGGCTG GCAAAGGGTA GCAATCACAT GCTGACCATT TCTGGCACGA CCATCGAACG TACAATGGAT CCAGAGCGTG CCGATTGGTT AGCCGCATTC TCATCTCGCG GTCCAAGCCC ATCAACGCCT GAGGCGCTGA TCCCTGCCGT TGCTGCGCCA GGGGTGGATA TTTATGCAGC CTTCGCCGAT GAACACCCAT TCAGCAGTTC AGCAGCATCG GGTGATTTTG CCTTCCTAAG TGGTACTTCA ATGGCATCGC CACATGTAGC GGGCTCTATG GCCCTGTTAC GTCAGGCTCA ACCAAGTTGG AGCGCGACTG AGATCCAATC TGCATTGGCG ATGACGGCTG AAAACAAAGT GCAATACTAC CGCTTGGATG ACAAGAATGG TGATGTGGCT TTAGCTTCAA CCTACCGTGC GGGGACTGGC CGTATCAACG TGGCCAACGC AGTAAATGCT GGCTTTGTGA TGGATGAAAC CGTTGAACGC TTTAAAGCGG CTGATCCGCA TAATGGCGGT GCCGTTCATA AGCTGAATAT TCCGCAGTTA GTGAACTTTG AATGTAAGCC TAAGTGTCAA TGGATCCGTA CTATCAAGGC GACCAAAGAT GGCACTTGGA GCGTGACCAA CGGTGATGTG ATTAACTGGA GCGTCGATTC ACGTTCACAG TTCGTCCAAA ACGGTGTGTC AATTAAAGTT ACGCCAAACG AGTTTACTCT AGCGGCCGGC GAAACCATGG ATATCGTGGT CGAAGCATCG ATCATGGATA CTCAAGACTG GTTCAGTAAC GCGGAAGTTG AACTGCATTC AAACTTAACC TTCACCGAAA CCAGTGGTAG AGCGTCAGAA GCGCACTGGC CTGTGGTATT CAAATACGAC AAAAATGGTA TGCCAGGACG CTTGAGTGCC GTGGCTCACC GTAATGAGGC AAATGCTGTC ATCAAAGGTA TCGATTTACC TGAGGGCGAC AACATTCATG GTCGTATCTT TAGCCCTGTG AAAGCGGAAG TGAAAACCGT TGTGCTGCCG AAGGACAACG ATGGTAACTT CCCATGGAGT AGCAATGCTG ATTTAACCGT CAGTATGGAC GAGCGTATCG ATGAAGCCAC CTATGTGGAA ATGATTGATG TGCCTGCTAA TGCTCGCCGT TTAATCGTCG AATCCTTTGG TACGACTCAG TCTGAACTCA GTGAAGTTTT AGACAAAGGT AACCTGATCG TCTTCGTTGG TAAGGACTAT AACGGTAACG GTAAGGCCGA TCCTTTCGAA GAGCTGCTTT GTGTGTCTAA CCACATCCAA TACAACAACT TCTGTAATAT TAACCAACCA GAAGAAGGTA AGTATTGGGC GTTGTTCTAT AACCCAAGAA AAGGCTCTGC GAGTAACAAC TATTACAATG CGTTGGAAGA AACCTTCCAA TATGCAACGA CAGTTGTGAT GGACCAAGTT GCCAGCGAAA TGAGTGTCGA CGTTCCTGCG AGTAATGGTC GTGATCCGGT TGATATTACA GTTAACTGGG ATATGCCAGA GATGAAAGAA GGTGACGTGT ACTACTCGTT ACTGGACTTT GGAACCTCAG AGGTGAACGC CGGTAACATT GGTAAAGTTG CCTTTAAACT GGAACGCGGT GTGGACGATG TACACTTAGA CGCAACCCAA ACTGCGGCAG TGGCTGGCGA TCAAATTCCG TTTACCTTCG AGGTGCAACC TAACAATACT GGCGCTGACC GTGCATTTAG CATTGTCGCG ACCATTCCGT CAGGATTTAG CCTACGTGCT GAGGACGTTC TAAGCTCTTC AAGCACTATC GTTAAAGATG TGAAACTGGA AAATGGCAAG CTCACCATTA GCGGTATACA ACCCGATACC AGCGAGCTTG AGCCACGTTA CAACATCACC ACTAACGTTG ATGATGCTAT GTGCCGTACG CCGGACTTCG GTAACAAGAA ACCGGGCGGT TACGTGAACT TAGAAGAGTT CACTATCTAC CCAATCTTCA GTGGTTTTGC GCCAGTTGAG TATGGTGCTA ACGGTAAGGC ATTAAGTGGT AAGGATAATA ATATCCTGTA TCGCAACGGT ATTACCTTAC CAATCAGTAC CGTCTTTAAT GGTGCCTATG ACAGTTTCCA CCTGTACAAC AACAAAGATA GCATCAACGT TTGGAAGCAG AACCACTTGG ATATTCGTGG TCACGGTATC GTGTCCTTAT TCCAAAATCA GCCATTCTTC TACCCATACC ATGACATCTT CCCGTACAAC AGCTTCCCAT ACGCTTCTAT CGGTATGCTG TGGCGTGGAT TTGGTCTAGG TGCGGGGGCA ACTCAAGATA TTCTGAGTGT GCCATTGATT AATAAGACTA CTGAACGTGC GGGTATCTCT ATCGCGAGTA CACCAAGCGG TTGGGGTATT TTGGAATACG ATAATGCTCG TTCTTATAAG CCTTTAGGAT ACGATGCAAA CCGTGTTTAC CAATGGGAAG AGAAGGATGA TAGGTTCGAC TTCGAGCTGA TCTTCAACGC TAACACCCGC TTCGGTGATG GTGAATACGA ATTGATGATG GCTTACGACA ATATCAACTT TGGTTCTCAA GATGACCGTG GTTCTATTGG TCTGCAAGGC TTCCAAGGCG GTCTATATGC CTATGGTCCA CTGCAGAAGT ACCTAGGTGA GCAATATGCC TTCAATAATC TGAAGGACAA AATCCACAAC GGTTTAGTGA TTTGTTATGA CTACGTTGGC CCAGAGTCGT CACAGTTTGA AGTGACTGCA TGGACTACCG TGAAAAATAA CGCCGCTGGC CAAGTGTTGA CGGTTGATGC GGTTAGCCAA GTTGAAGGTA TGGCTGACAT CAGCATGAGC CACAGTGTAA CTGTGCCGTC CAATATCAGT ATTGGTGCGA TTGCCGACCA AACGATCGCG GAAAACACTA GCCTAGAAGG TCTTAAGGTC GTGTTTGCCG ATGAGCAAAA CAGCGTGAAC AAGATCACCG TAACAGGTGA GCACATCAGC GCTGTCGTGG ATGGCAATAC CTCTGGTTCA AGCATCACTA TCACGCCAGA AGCTAACTTC CACGGCGACG TAGAAGTCAC AGTGACTGTG AGTGATGTGG AAAGCCCAAC AGATGCAGCG AGCACCAGCT TTATGCTGAC CGTTGAATCC GATGGTGTTG AGCCACCAAC TACGCCTGTA ACACCTGAAC CAAAGCCTGA CACCAACAAA GATAGCGGTG GTGCGTTAGG TGGTTTGTCT ATGTTACTCG CACTGGGGGC ATTGATCAGA AGAAGAAAAA CTCACTAA
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Protein sequence | MKLKILTCTI AAALYGAGAM QAAASIGDVH KLKGLQLTSD QIAKLNAPET KIDDADLGIG LNLQITPQAN KFEFEDGITG EQIYIVRLNQ KPLAQVSTEL LASTTASKTF GKSSNSKLFV AGQPASSAVK NYRSRLLDSQ RQVIADVQST VGARQVRQQF TNAVNGFSIA MTQEEAQRVS QLANVSSVRR SKTYELLSDA GPELIQANKI WSGEATDSVP YKGEGIIVGI VDTGINSDHR SFADVGDDGY DHTNPWNAGN YVGDCTKSGF ETMCNDKLIG VRSYPVITDN FTSGVYGATR PAVGEDYQGH GTHVASTAAG NVLLDVDYVN PDSGTEASDG SVIKPKLFPR MSGVAPHANI VAYQVCHPSN AINAGCPGEA LIAGIEDAIN DGVDVINFSI GGQDSNPWAD DVELAFLSAR EAGISVAVAA GNSGQPVGYK EYFGRIDHAS PWLMNVAAST HAREVEITTK LIDPMGGSEV PKWSEIVGGA INTAPVTGMV VNAKNFGDEY CAKPFPAGTF DLKDGDGNPT DVIVVCKRNS LEDPNAVART AKADNIKAGG ADGMIMYNYA TADALVPTAS YSVPSIHITK EEWDGRYDNG LAGYGLSDWL AKGSNHMLTI SGTTIERTMD PERADWLAAF SSRGPSPSTP EALIPAVAAP GVDIYAAFAD EHPFSSSAAS GDFAFLSGTS MASPHVAGSM ALLRQAQPSW SATEIQSALA MTAENKVQYY RLDDKNGDVA LASTYRAGTG RINVANAVNA GFVMDETVER FKAADPHNGG AVHKLNIPQL VNFECKPKCQ WIRTIKATKD GTWSVTNGDV INWSVDSRSQ FVQNGVSIKV TPNEFTLAAG ETMDIVVEAS IMDTQDWFSN AEVELHSNLT FTETSGRASE AHWPVVFKYD KNGMPGRLSA VAHRNEANAV IKGIDLPEGD NIHGRIFSPV KAEVKTVVLP KDNDGNFPWS SNADLTVSMD ERIDEATYVE MIDVPANARR LIVESFGTTQ SELSEVLDKG NLIVFVGKDY NGNGKADPFE ELLCVSNHIQ YNNFCNINQP EEGKYWALFY NPRKGSASNN YYNALEETFQ YATTVVMDQV ASEMSVDVPA SNGRDPVDIT VNWDMPEMKE GDVYYSLLDF GTSEVNAGNI GKVAFKLERG VDDVHLDATQ TAAVAGDQIP FTFEVQPNNT GADRAFSIVA TIPSGFSLRA EDVLSSSSTI VKDVKLENGK LTISGIQPDT SELEPRYNIT TNVDDAMCRT PDFGNKKPGG YVNLEEFTIY PIFSGFAPVE YGANGKALSG KDNNILYRNG ITLPISTVFN GAYDSFHLYN NKDSINVWKQ NHLDIRGHGI VSLFQNQPFF YPYHDIFPYN SFPYASIGML WRGFGLGAGA TQDILSVPLI NKTTERAGIS IASTPSGWGI LEYDNARSYK PLGYDANRVY QWEEKDDRFD FELIFNANTR FGDGEYELMM AYDNINFGSQ DDRGSIGLQG FQGGLYAYGP LQKYLGEQYA FNNLKDKIHN GLVICYDYVG PESSQFEVTA WTTVKNNAAG QVLTVDAVSQ VEGMADISMS HSVTVPSNIS IGAIADQTIA ENTSLEGLKV VFADEQNSVN KITVTGEHIS AVVDGNTSGS SITITPEANF HGDVEVTVTV SDVESPTDAA STSFMLTVES DGVEPPTTPV TPEPKPDTNK DSGGALGGLS MLLALGALIR RRKTH
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