Gene Shewmr7_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2471 
Symbol 
ID4256360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2925034 
End bp2925558 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content48% 
IMG OID638123146 
Producthypothetical protein 
Protein accessionYP_738513 
Protein GI114047963 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000459273 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00620906 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAACAG TAAAGATACC GGTTTCAATT GATCCTATTC GCGCCGCCTC GAGCCGTTCT 
ACCTATGAGG GGATAGTGCC AGGGCAGCAA TTGAAAAGAT TAAATGAGTT ATGTGCCGGC
GACTGTTCCG ATGTGGCAGT GTCGATTGAA TGTGGCGTAG ATTTGCAGGG GATAGTCTAC
CTGAAAGGGA AGGCTGTGAC GGAGCTCACT CTGGTTTGTC AACGTTGCAT GACGCTATTT
ACCACTGAGG TTACGGTCGA GTTTTGCTTC GGTCCATGCC GGACTAAGGC AGAAATCGAT
GAGCTCCCGG ATGCGTATGA CCCAATTGAG TGCAATGAGA TTGGCGAAGT ACGTCTGCAT
CAATTGATCG AAGATGAATT GATAGTCGCT ATGCCTATCA TCCCGATGCA TGAAGAAACT
GATTGCAACA TCGGGTCAAT GGACATAGTT GTAGGCGAGA TCGAACCCGC TCAAGAGGAG
CGTCCAAATC CGTTTGCAGT GTTAGAAAAA CTGAAGAGCA AGTAA
 
Protein sequence
MQTVKIPVSI DPIRAASSRS TYEGIVPGQQ LKRLNELCAG DCSDVAVSIE CGVDLQGIVY 
LKGKAVTELT LVCQRCMTLF TTEVTVEFCF GPCRTKAEID ELPDAYDPIE CNEIGEVRLH
QLIEDELIVA MPIIPMHEET DCNIGSMDIV VGEIEPAQEE RPNPFAVLEK LKSK