| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2145 |
|---|
| Symbol | |
|---|
| ID | 4255279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2538598 |
|---|
| End bp | 2539146 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638122813 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_738190 |
|---|
| Protein GI | 114047640 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3108] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0692827 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTTAC TTTGTCCTGC CCGTAGGCAG TTGTTGTTAG GCCTCAGTGG TGTGGCATTG
TGTTCTTTAA TTCCTTCTAA AGCGTTTGCG AGTCGGTCGA CTAAAGGGGT TCGCGATCTC
AGCCTCTATA ATCGCCACAC GGGCGAGCAT AACAATGGCA GTTATTGGAT TGACGGCCAT
TACCAGAGCG AAGTGTTGAA TGATTTTAGT CATTTACTGC GGGATCATCG CCAGAATGTG
GCGGCGCCCA TGGATAAACG CTTATTCGAT CTGCTTTACA CCCTCAAGAG CACCCTCAAT
ACGGAGAATG AGATCCATGT GATTTCAGGC TATCGTTCGC CTAAGACCAA CGCCATGTTG
GCGGGTAAGA GCAGTGGGGT GGCAAAGAAA AGTTATCACA TGCAAGGTAT GGCAATGGAT
ATCGCTATCC CAGGAGTGAA TCTTAAGACT CTTAGAGATG CGGCGTTATC ACTCAAATTG
GGTGGTGTGG GTTATTACCC TAAGTCGGGC TTTGTACATG TTGACTGTGG TCCAGTACGC
CACTGGTAG
|
|---|
| Protein sequence | MTLLCPARRQ LLLGLSGVAL CSLIPSKAFA SRSTKGVRDL SLYNRHTGEH NNGSYWIDGH
YQSEVLNDFS HLLRDHRQNV AAPMDKRLFD LLYTLKSTLN TENEIHVISG YRSPKTNAML
AGKSSGVAKK SYHMQGMAMD IAIPGVNLKT LRDAALSLKL GGVGYYPKSG FVHVDCGPVR
HW
|
|---|
| |