Gene Shewmr7_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1880 
Symbol 
ID4256839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2218401 
End bp2218766 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content49% 
IMG OID638122535 
Productresponse regulator receiver protein 
Protein accessionYP_737926 
Protein GI114047376 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.578036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA AAATATTAAT TGTTGATGAC TCGGCCGCGA TCAGACAGAT GGTTGAGGCG 
ACGTTAAAGT CGGCAAATTA CCAAGTCGTG CTCGCCAAGG ATGGTCGTGA AGCCCTAGAT
TTATGTGGTG GACAACGATT CGATTTTATT TTGACGGATC AAAATATGCC CCGTATGGAC
GGTTTGACGC TCATTAAATC CCTTAGAGCC ATGACGGCGT TTATGCGTAC GCCCATCGTC
ATGCTAACCA CCGAAGCCGG AGAAGACATG AAGGCCCAAG GTCGAGCCGC TGGCGCAACG
GGATGGATGG TCAAGCCCTT TGATCCGCAG AAGCTATTAG CTATCACAGC CAAAGTGCTG
GGCTAA
 
Protein sequence
MSKKILIVDD SAAIRQMVEA TLKSANYQVV LAKDGREALD LCGGQRFDFI LTDQNMPRMD 
GLTLIKSLRA MTAFMRTPIV MLTTEAGEDM KAQGRAAGAT GWMVKPFDPQ KLLAITAKVL
G