| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0278 |
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| Symbol | |
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| ID | 4256214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 307652 |
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| End bp | 309814 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638120885 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_736340 |
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| Protein GI | 114045790 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAT TAAAAGTTGC CGCCAGCTTA TCTGTTAGAT CATGTTTTGA AATAGACAGA
GAGGTAGTCA ATGTATTAAC CACAGATTTT TGCGATGTGG GTGCGGCTGT AGTCTCTGTT
GATGATGTTA GAAATGGTAT TGTTGAAAAA ATTAAAAATA CCGGATTAAA ACTGCCTATT
TTTGTATCAG TTTGCTGTGA AGAAACCTTC CCAGATGATA TTTGTTCCTC TATTACCGGA
GTATTTGAAC TCTGTGGTAG CAATACCGAT TTCTATGGTA AACAGGTCGA AACCGCCATT
CAAAAATATG AGCAAGCCCT ATTACCGCCG TTCTTTGGCA CACTGAAAAA ATACGTGGAA
ATGGGCAACT CCACCTTCGC CTGCCCAGGC CATCAGGGTG GTCAATTCTT TCGTAAACAT
CCTGTGGGTC GCCAATTTTT CGATTTCTTT GGCGAAACCA TTTTCCGCTC AGATATGTGT
AATGCCGACG TTAAGCTCGG CGATCTGTTA ATCCATGAAG GCGCGCCACT GGATGCACAA
AAATACGCGG CTAAGGTCTT TAACGCCGAT AAAACCTACT TTGTGCTTAA CGGCACTTCT
TCTTCAAATA AAGTGGCGAC CAACGCACTG CTGGCGAAGG GTGATCTGGT ATTATTCGAC
CGTAACAACC ATAAATCCAA CCACCATGGC GCGTTAATTC AAGCCGGTGC GACACCGATT
TATTTAGAAA CCGCCCGTAA CCCCTTCGGC TTTATTGGCG GTATCGACGC CCACTGCTTC
CAAGAGTCTT ATTTAAGGGA GCAGATCCGC GCCGTTGCAC CTGAGCGTGC CGATGAACAA
CGTCCATTCC GTTTAGCTAT TATCCAGCTG GGCACCTACG ATGGCACTAT CTACAACGCT
CGCCAAGTAG TTGATCGCAT CGGACATCTA TGTGATTACA TTCTGTTTGA CTCAGCTTGG
GTTGGCTATG AGCAATTTAT TCCCATGATG AATGACTGCT CGCCTCTGCT GCTCGAACTG
ACGCCTGAAG ATCCCGGTAT TATCGTGACT CAGTCAGTGC ACAAACAGCA GGCTGGCTTC
TCACAAACCT CGCAAATTCA CAAAAAAGAC TCACATATCA AAGGCCAAGC CAGATACTGC
AACCATAAAC GCTTCAACAA CGCCTTTATG ATGCACGCCT CTACCAGCCC CTTCTATCCG
CTGTTTGCCG CATTGGATGT GAACGCTAAA ATGCACGAAG GCGCCAGCGG CCGTTATCTG
TGGCGTGAGG CGGTAAAAGC CGGTATTGAA GCTCGCAAGT TACTGCTCAA AAAATGTAAA
TATATCAAGC CATTTATCCC AAGCATGATC GAGGGACGCC CATGGCAGGA TTATCCAACC
GAACAAATGG CCGATGATTT ACGTTTCTTC GAGTTTGAAC CCGGACAAAA ATGGCACTCC
TTCGACGGTT ACGAAAAAGG CCAATATTTC GTTGACCCTT GTAAGTTCCT ATTAACCACG
CCTGGTATCG ATGCCGAAAC GGGTAAATAT ACTGAGTTTG GTATCCCAGC AACTATTCTG
GCTAACTTCT TACGTGAAAA TAATATTATT CCCGAGAAGT GCGACTTAAA TTCGATTTTA
TTCCTGATGA CGCCTGCGGA AGATATGGCG AAGATGCAAC ACTTAGTGTC GCAAATATCC
CGTTTCGAAA AGTTAGTCGA TGAAGATGCG CCATTATCTG AAGTACTACC TAACGTCTAT
AACGCTAATA AAGCCCGTTA TAAAGACTAT ACCATTCGTC AACTCTGCCA AGAAATGCAC
AACCTTTATG TCAGCCATGA CGTAAAACAA CTGCAAAAAG AAATGTTCCG TCAGGCGCAT
TTCCCAACAA AAGTGATGGA TCCACAGGAA GCCAACCTCG AATTTATCCG TGGCAAAGTG
GAGTTAGTGC CACTGTCACA AATTGAGGGA CGGATTGCTG CAGAAGGTGC ATTGCCTTAC
CCACCAGGGG TGCTATGTGT GGTCCCAGGT GAAATATGGG GCGGTGCGGT ACAACGTTAT
TTCTTAGCCC TTGAAGAAGG CATCAACTTA TTACCCGGAT TCTCCCCTGA ATTACAAGGT
GTTTACCTCG AAAACACCCC AGACGGAAAA ATCCAAGCCC TAGGTTATGT ATTAAATAAA
TAA
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| Protein sequence | MKSLKVAASL SVRSCFEIDR EVVNVLTTDF CDVGAAVVSV DDVRNGIVEK IKNTGLKLPI
FVSVCCEETF PDDICSSITG VFELCGSNTD FYGKQVETAI QKYEQALLPP FFGTLKKYVE
MGNSTFACPG HQGGQFFRKH PVGRQFFDFF GETIFRSDMC NADVKLGDLL IHEGAPLDAQ
KYAAKVFNAD KTYFVLNGTS SSNKVATNAL LAKGDLVLFD RNNHKSNHHG ALIQAGATPI
YLETARNPFG FIGGIDAHCF QESYLREQIR AVAPERADEQ RPFRLAIIQL GTYDGTIYNA
RQVVDRIGHL CDYILFDSAW VGYEQFIPMM NDCSPLLLEL TPEDPGIIVT QSVHKQQAGF
SQTSQIHKKD SHIKGQARYC NHKRFNNAFM MHASTSPFYP LFAALDVNAK MHEGASGRYL
WREAVKAGIE ARKLLLKKCK YIKPFIPSMI EGRPWQDYPT EQMADDLRFF EFEPGQKWHS
FDGYEKGQYF VDPCKFLLTT PGIDAETGKY TEFGIPATIL ANFLRENNII PEKCDLNSIL
FLMTPAEDMA KMQHLVSQIS RFEKLVDEDA PLSEVLPNVY NANKARYKDY TIRQLCQEMH
NLYVSHDVKQ LQKEMFRQAH FPTKVMDPQE ANLEFIRGKV ELVPLSQIEG RIAAEGALPY
PPGVLCVVPG EIWGGAVQRY FLALEEGINL LPGFSPELQG VYLENTPDGK IQALGYVLNK
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