| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3228 |
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| Symbol | |
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| ID | 4253796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3858016 |
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| End bp | 3859086 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638119868 |
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| Product | porin |
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| Protein accession | YP_735353 |
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| Protein GI | 113971560 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000270281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000479229 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGA CATTCATCTC TGCATCAGTT GCATCAGTAC TGGCACTGGC TTCATTCGGT
GCGCTAGCCG AAGGCCCAAG CTTCTACGGT CGTTTAGAAC TTGCATTAAC CAATACTGAG
ACAGGTGCAA CTCTACAATC TGGTACTAAC GGCTTAGAGG CAAATTATGC CGATGAGAAC
AACGCTGGTA CCTATTTAGA AAACAACTTC TCTCTATTAG GTGTTAAAGG TTCTGAAAAG
ATTGCAGATG GCTATGACGT TGTTTATCAA ATGGAATTCC AAGTTGAAAA CACTTCTGGT
ACTGGTGATG TGTTCAAAGC TCGTAACACT TACTTAGGTT TAAAAACTAA TGCAGGTACT
GTATTAGTGG GTCGTAATGA CACAGTATTT AAACAAGCTG AAGGCGCGGT TGACGTATTT
GGCAACACCA ACGCGGATAT CGACCGTTTA ATTTCAGGAC AAACACGTAG CGCAGATGGT
ATTTGGTACT ACTCACCAAA AATTGCTGGC TTAGTTACTT TAAACGCAAC TTATTTAATT
GATGACAATG AAAAAGTAAC TTCTGCCGAA GGTAAAGATA GCTCAAACGA TTATGCATTA
AGTGCGACCT TAGGTGATAG CAAGTTTAAA GAGCAAAACT ACTATTTAGC AGTAGCCTAT
AATAAAGGTA TCTCAGGAAT TGATGCATAC CGTGGTGTTG CTCAAGTAAA ATTAGGTCAG
TTCAAACTCG GTGGTTTATT CCAAAACTCT GAAAGCGTAG CTGACAGCTC TATTGACGGT
AACACTTACT TCGTTAACGT AGTTTATGAC CTGAACGGTG TGAACCTGAA AGCTGAATAC
GGTTACGATG AAGCTGGTTT CGGTAAATAT TACAGCACGT TAGGTCAAGC AGGTGCTGAC
GATATTAGTG TAAACAACTT CAACGTTGGT GCTGACTACC GTTTCTCTAA ATCAACTATG
GTGTATGGCC AGTACTCAAT GTACAAAGGC GACTACAAAG ACACTACTGG TGCTAAAATC
GACTTACAAG ACGACAACGT ATTCTCTGTA GGTGTACGTT ACGACTTCTA A
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| Protein sequence | MKKTFISASV ASVLALASFG ALAEGPSFYG RLELALTNTE TGATLQSGTN GLEANYADEN
NAGTYLENNF SLLGVKGSEK IADGYDVVYQ MEFQVENTSG TGDVFKARNT YLGLKTNAGT
VLVGRNDTVF KQAEGAVDVF GNTNADIDRL ISGQTRSADG IWYYSPKIAG LVTLNATYLI
DDNEKVTSAE GKDSSNDYAL SATLGDSKFK EQNYYLAVAY NKGISGIDAY RGVAQVKLGQ
FKLGGLFQNS ESVADSSIDG NTYFVNVVYD LNGVNLKAEY GYDEAGFGKY YSTLGQAGAD
DISVNNFNVG ADYRFSKSTM VYGQYSMYKG DYKDTTGAKI DLQDDNVFSV GVRYDF
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