| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2860 |
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| Symbol | nhaA |
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| ID | 4253431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3411794 |
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| End bp | 3412963 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638119495 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_734988 |
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| Protein GI | 113971195 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.611153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAG CAATTAGAAA TTTTCTGAGC CAAGAATCGG CTGGTGGCAT CCTATTATTA
GTTGCTGTTG CCTTAGCCAT GCTGATGGCC AATTCTCCTC TCGCGGGGCT CTATCAAGGA
TTTCTCGGTA CTGAAGTACA AGTCCGTGTT GGTGCACTCG ATCTGCATAA ACCGCTGTTG
TTGTGGATTA ACGATGGCCT AATGGCATTG TTTTTCTTAC TGATTGGTTT AGAGGTTAAG
CGTGAACTGT TGGAAGGTGC TCTATCGAGT GTCGCACAGG CTTCGCTGCC AACCTTCGCA
GCGATTGGTG GCATGTTAGT ACCAGCAGGC ATTTATCTGC TATTTAACTA TGGCGATCCT
GTGACACAAG CGGGCTGGGC GATTCCTGCG GCTACCGATA TCGCTTTTGC CTTGGGTATC
ATGGCGCTGC TGGGTAGCCG TGTGCCTGTG GCATTGAAGG TCTTCCTGTT GGCGCTCGCC
ATCATCGATG ACTTAGGCGT GATTGTGATT ATTGCGCTCT TCTACAGCAC CGATCTCTCG
ACCATTAGCC TGATTATTGC CAGCATTGCG ATTGTTGGTT TAGTTGCCTT AAACCGTAAA
GGCGTGACCG CATTAGCCCC CTATGGGGTA TTAGGACTCG TTCTGTGGGT GGCGGTATTA
AAGTCTGGAG TACACGCGAC TTTAGCCGGG GTGATTATTG CCTTCTGTAT TCCGCTGCGT
GCAAAAGACG GAAGCTCACC TTCTGAGCAC TTAGAGCATA GCTTGCACCC TTGGAGCACC
TTTCTGATCC TGCCAGTATT TGCGTTTGCG AATGCGGGGG TGGCCTTAGG AAACATGAGC
CTAAATACAC TGATCTCCCC TGTGCCAGTT GGTATTGCAT TGGGACTCAT GTTAGGTAAG
CCGATTGGTG TGATGCTGTT TAGTTACGCG GCCGTCAAAC TAAGATTGGC GCAATTGCCT
AATGGAATTG GTTGGAAGCA GATTGCGCCA GTAGCGGCTA TGTGTGGTAT TGGTTTTACT
ATGTCGATGT TTATTGCTTC GTTGGCATTT GAGCAAGCAG ACCCTATGTA CGGCGACTTA
GCACGCCTTG GCACCTTGAT CGGCTCGATT CTTGCGGCCT TGATCGGGTA TTTCTGGTTA
TCAAAAGTGT TACCAAAACA AGGAGTATAA
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| Protein sequence | MEKAIRNFLS QESAGGILLL VAVALAMLMA NSPLAGLYQG FLGTEVQVRV GALDLHKPLL
LWINDGLMAL FFLLIGLEVK RELLEGALSS VAQASLPTFA AIGGMLVPAG IYLLFNYGDP
VTQAGWAIPA ATDIAFALGI MALLGSRVPV ALKVFLLALA IIDDLGVIVI IALFYSTDLS
TISLIIASIA IVGLVALNRK GVTALAPYGV LGLVLWVAVL KSGVHATLAG VIIAFCIPLR
AKDGSSPSEH LEHSLHPWST FLILPVFAFA NAGVALGNMS LNTLISPVPV GIALGLMLGK
PIGVMLFSYA AVKLRLAQLP NGIGWKQIAP VAAMCGIGFT MSMFIASLAF EQADPMYGDL
ARLGTLIGSI LAALIGYFWL SKVLPKQGV
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