| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2499 |
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| Symbol | |
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| ID | 4253070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2970851 |
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| End bp | 2971342 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638119134 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
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| Protein accession | YP_734627 |
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| Protein GI | 113970834 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000002864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0180843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACAT TACACACTAA TTTTGGCGAC ATTAAACTGC AACTGAACGC CGAAAAAGCA
CCGCTGACCG TGGCAAACTT TATGAAATAT GTTGACGAAG GTTTCTTCGA CGGCACCATT
TTCCACCGTG TAATTGACGG CTTTATGATC CAAGGCGGTG GCTTTACCGC TGAAATGAGC
CAAAAACGTT GCCATGAGCC AGTGAAAAAC GAAGCCAACA ACGGTTTATC AAACCGTACT
GGTACTATCG CGATGGCACG TACTTCTGAT CCACACTCAG CGACGGCTCA GTTCTTCATC
AACGTAAACG ATAACACCTT CCTCGATTTC AAATCTGAAA GCATGCAAGG TTGGGGTTAC
TGCGTATTTG GTGAAGTCGT TGAAGGCATG GACATCGTTG AAAAAATCAA AGCTGTCAGC
ACTGGTAACC GTGGCATGCA CCAAGATGTG CCATTAGAAG CGGTTGTGAT TGAAAAAGTA
AGTGCGGCCT AA
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| Protein sequence | MITLHTNFGD IKLQLNAEKA PLTVANFMKY VDEGFFDGTI FHRVIDGFMI QGGGFTAEMS
QKRCHEPVKN EANNGLSNRT GTIAMARTSD PHSATAQFFI NVNDNTFLDF KSESMQGWGY
CVFGEVVEGM DIVEKIKAVS TGNRGMHQDV PLEAVVIEKV SAA
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