| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2346 |
|---|
| Symbol | |
|---|
| ID | 4252917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2796375 |
|---|
| End bp | 2796608 |
|---|
| Gene Length | 234 bp |
|---|
| Protein Length | 77 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638118971 |
|---|
| Product | SirA family protein |
|---|
| Protein accession | YP_734474 |
|---|
| Protein GI | 113970681 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0425] Predicted redox protein, regulator of disulfide bond formation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.416048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000487815 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTA TTGATTTAAC ATCATTTCGC TGCCCCGTTC CCTTGGTTAA GGTCAAACTT
GCGTTGAAGT CTGTGTCTGC TGGCGACAGC TTACATATCC TACTCTCAGA CCCAGGTTCC
CGCCGAGATG TTCCCGCGTT TTTTAAAAAA CAGGGGCATA CCGTCGTGAC ATTGCAAGAT
GACGCCGGCC AATTAGGGCT ATTAATCACA AAAGTTGATT TATCGCAGGG CTAA
|
|---|
| Protein sequence | MIFIDLTSFR CPVPLVKVKL ALKSVSAGDS LHILLSDPGS RRDVPAFFKK QGHTVVTLQD
DAGQLGLLIT KVDLSQG
|
|---|
| |