Gene Shewmr4_2268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2268 
Symbol 
ID4252839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2713339 
End bp2713827 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content50% 
IMG OID638118893 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_734396 
Protein GI113970603 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000395239 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTA AAGACGATAT GGTTGTGCAG TTTAACTACA CTCTGCGCGA CGAAAAAGGC 
GAAGTGATCG AGACGAACGA AGGTCGCGAG CCGATTGCTT ACTTACACGG CCATGACAAC
ATGATGCCAG GTGTTGAGAA TGCAATTAAT GGTAAAGCGA TTGGTGAAAA GTTCACTGTT
ACTCTGCCAT GCACTGAAAC CTATGGTCAA CGTATCGAAG GTGAAGCGGC GCAGCAACGT
GTGTCTGTGA AGCACCTGTT AGGCGCTAGC GTGTGGAAAC CAGGCATGAC GGCTGTGGTT
CACACTGATC AGGGTCAACG TCAAGTGACT ATCGTCAAAG TGGGTAAGTT TATGGCAACT
GTGGATGTTA ACCATCCATT AGCGGGCCGT GACTTAACCT TCGATATCGA AGTGGTTGGC
GCCCGTGATG CGACCGATGA AGAAATCGCC CACGGTCATG CCCACGGTGT AGGCGGTCAC
CACCACTAA
 
Protein sequence
MSIKDDMVVQ FNYTLRDEKG EVIETNEGRE PIAYLHGHDN MMPGVENAIN GKAIGEKFTV 
TLPCTETYGQ RIEGEAAQQR VSVKHLLGAS VWKPGMTAVV HTDQGQRQVT IVKVGKFMAT
VDVNHPLAGR DLTFDIEVVG ARDATDEEIA HGHAHGVGGH HH