| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2182 |
|---|
| Symbol | |
|---|
| ID | 4252755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 2609658 |
|---|
| End bp | 2610368 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638118808 |
|---|
| Product | peptidase M22, glycoprotease |
|---|
| Protein accession | YP_734312 |
|---|
| Protein GI | 113970519 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAC CCCAAGACTC TGTTTGTATT CTCGCCCTCG ACACTTGTAC CGAAGCTTGT
TCGGCTGCCC TGTATTATCA AGGACAGATT TTTGCTGAGT TAGCCGATGC GCCTCGGGAG
CATAGTCAGC GTTTATTGCC TATGGTGGAA GCCGTATTAA AACAAGCCAA TGTCGGCTTA
GATAAACTGG ATGCGATTGC CTACGGCCGT GGGCCAGGTA GTTTTACGGG TATCCGTATT
TGCACCAGCA TGACCCAAGG TTTAGCCCTA GGGTTAGACC TACCCGTTAT CGGCATTTCC
ACCTTAGCGG CCATGGCACA AATGGCGATT GCTGAGCACG CTGCCGAGCA AGTGCTCTGT
TGTATCGATG CTCGTATGGG AGAAGTGTAC TGGGGGCAAT TTGTTGCCGT CGATGGCATT
GCCACCTTAG TCGGTAAAGA GGTAGTGAGC GTGCCAGAGC AGGTTGAACT GGCATTCGAT
CTTAATAGAG CCATTGTCGG CTGTGGCACT GGGTTTGATG CTTATCCCGA GTTACTAGCG
TTAGGCAGCG GCATTACTTC CTTAGCGGCG GTGAAGTATC CCGATGCTCG AGCCATGTTA
GCGCTGGCCG AAGTCGGTAT CAAAGCGGGA TTAACCACCA GTGTCGATGA ACTCGAACCT
GTATATTTAC GTGATACTGT GACATGGAAA AAGTTGCCGG GACGTGAATA A
|
|---|
| Protein sequence | MTTPQDSVCI LALDTCTEAC SAALYYQGQI FAELADAPRE HSQRLLPMVE AVLKQANVGL
DKLDAIAYGR GPGSFTGIRI CTSMTQGLAL GLDLPVIGIS TLAAMAQMAI AEHAAEQVLC
CIDARMGEVY WGQFVAVDGI ATLVGKEVVS VPEQVELAFD LNRAIVGCGT GFDAYPELLA
LGSGITSLAA VKYPDARAML ALAEVGIKAG LTTSVDELEP VYLRDTVTWK KLPGRE
|
|---|
| |